RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 KLHL18O94889 574 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 NR2F1P10589 423 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 ERGP11308 486 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 LAMP2P13473 410 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 CBLP22681 906 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 CRISP1P54107 249 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 MLLT10P55197 1068 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 PRSS53Q2L4Q9 553 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 MLIPQ5VWP3 458 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 SLC38A5Q8WUX1 472 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 SLC35G5Q96KT7 338 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 RPP25Q9BUL9 199 aaKnown RBP9.13□□□□□ -0.95
COL6A3-204ENST00000392003 LGR4Q9BXB1 951 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 DCSTAMPQ9H295 470 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 ANKHQ9HCJ1 492 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 TEKT2Q9UIF3 430 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 OR1A2Q9Y585 309 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 PCYT1BQ9Y5K3 369 aaPredicted RBP9.13□□□□□ -0.95
COL6A3-204ENST00000392003 LRRK1Q38SD2 2015 aa9.13□□□□□ -0.95
COL6A3-204ENST00000392003 A0A0G2JN53 185 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 EPOPA6NHQ4 379 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 SLC31A1O15431 190 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 NDUFA2O43678 99 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ADH1BP00325 375 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 STSP08842 583 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 DRD2P14416 443 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 CD53P19397 219 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 C21orf33P30042 268 aaPredicted RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 HMGA2P52926 109 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 UGT2B15P54855 530 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 TRA2BP62995 288 aaKnown RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ST3GAL4Q11206 333 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 HYAL1Q12794 435 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 TCEA2Q15560 299 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 RPS26P11Q5JNZ5 115 aaPredicted RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 TMEM236Q5W0B7 351 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ZNF776Q68DI1 518 aaPredicted RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 DEF8Q6ZN54 512 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 AMER2Q8N7J2 671 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ASCC1Q8N9N2 400 aaKnown RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 KBTBD8Q8NFY9 601 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 VANGL1Q8TAA9 524 aaPredicted RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ZNF675Q8TD23 568 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 XAGE5Q8WWM1 108 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 FGF14Q92915 247 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 C17orf62Q9BQA9 187 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 NMNAT1Q9HAN9 279 aaPredicted RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 SEMA3GQ9NS98 782 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ACSS1Q9NUB1 689 aaPredicted RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 C5AR2Q9P296 337 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 P2RX2Q9UBL9 471 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 GON4LQ3T8J9 2241 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 CHD7Q9P2D1 2997 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ATG2BQ96BY7 2078 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 OR10H3O60404 316 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 CLEC3AO75596 197 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 RPLP0P05388 317 aaKnown RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 IGFBP4P22692 258 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ACVR2AP27037 513 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 PTGES3Q15185 160 aaKnown RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 DUSP7Q16829 419 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 OR4C11Q6IEV9 310 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ADGRF3Q8IZF5 1079 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 DYNC2LI1Q8TCX1 351 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 Q96MT0 163 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 CAMK1GQ96NX5 476 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 PSD2Q9BQI7 771 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 SPATA5L1Q9BVQ7 753 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 BCL2L14Q9BZR8 327 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 UCK2Q9BZX2 261 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 KCNN2Q9H2S1 579 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ERVMER34-1Q9H9K5 563 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ZSCAN32Q9NX65 697 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 MS4A12Q9NXJ0 267 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 GPR83Q9NYM4 423 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 MGAT4BQ9UQ53 548 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 SH3D21A4FU49 640 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ARRDC5A6NEK1 342 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 H3BN98 237 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 SCAMP1O15126 338 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ADAP00813 363 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 H1F0P07305 194 aaKnown RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ACADMP11310 421 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 C5AR1P21730 350 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 IDUAP35475 653 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 RAB28P51157 221 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 FRMPD2BQ6IN97 320 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 BHLHB9Q6PI77 547 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 CASP12Q6UXS9 341 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 RD3Q7Z3Z2 195 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 OR6Q1Q8NGQ2 317 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 OR8K3Q8NH51 312 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 RPL3LQ92901 407 aaKnown RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ROGDIQ9GZN7 287 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 MKRN2Q9H000 416 aaKnown RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 XKR8Q9H6D3 395 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 TRPV4Q9HBA0 871 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 MRPS30Q9NP92 439 aaKnown RBP9.12□□□□□ -0.95
COL6A3-204ENST00000392003 SDHAF3Q9NRP4 125 aa9.12□□□□□ -0.95
COL6A3-204ENST00000392003 ZCCHC3Q9NUD5 404 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms