RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 OR6M1Q8NGM8 313 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 OR4F5Q8NH21 305 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 OCC1Q8TAD7 63 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 GGHQ92820 318 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 VSIG2Q96IQ7 327 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 SMIM14Q96QK8 99 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 AGPAT1Q99943 283 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 NICN1Q9BSH3 213 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 ST6GALNAC5Q9BVH7 336 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 GLT8D2Q9H1C3 349 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 OPN3Q9H1Y3 402 aaPredicted RBP0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 DCTPP1Q9H773 170 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 SLC25A19Q9HC21 320 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 ESM1Q9NQ30 184 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 EXOSC3Q9NQT5 275 aaKnown RBP0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 CENPMQ9NSP4 180 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 DNAJC11Q9NVH1 559 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 VPS54Q9P1Q0 977 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 EMCNQ9ULC0 261 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 GPR132Q9UNW8 380 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 RNF115Q9Y4L5 304 aa0.84□□□□□ -2.27
SNORD28B-201ENST00000390993 A0A087X0K7 114 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 A0A0A6YYD4 124 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 TRBV7-9A0A0J9YWB2 115 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 MACROD2A1Z1Q3 448 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 GTPBP10A4D1E9 387 aaKnown RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 OOEPA6NGQ2 149 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 DHRS7CA6NNS2 312 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ERVV-1B6SEH8 477 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 SLC17A2O00624 439 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ABCD4O14678 606 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 CHEK1O14757 476 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 SLC30A4O14863 429 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ZNF861PO60384 105 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 DKC1O60832 514 aaKnown RBP eCLIP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 SLC2A10O95528 541 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 GH1P01241 217 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 HPNP05981 417 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 SFTPBP07988 381 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 NUDT17P0C025 328 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 CYP11B1P15538 503 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 UGT1A6P19224 532 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 FUT3P21217 361 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 HTR1FP30939 366 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ACVR1BP36896 505 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 FRKP42685 505 aaPredicted RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 PPOXP50336 477 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 PPP5CP53041 499 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 GEMP55040 296 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 GNB2P62879 340 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 RPL32P62910 135 aaKnown RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 PUDPQ08623 228 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 EBI3Q14213 229 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 EIF2B1Q14232 305 aaKnown RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ZIC1Q15915 447 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 CAMK4Q16566 473 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 WSCD2Q2TBF2 565 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 SPATA46Q5T0L3 261 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 STEAP1BQ6NZ63 245 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 RPUSD3Q6P087 351 aaKnown RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 SIGLEC15Q6ZMC9 328 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 HSD17B13Q7Z5P4 300 aaPredicted RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 TMEM126BQ8IUX1 230 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 SIAH3Q8IW03 269 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 KLHDC8AQ8IYD2 350 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 CEND1Q8N111 149 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 PYROXD2Q8N2H3 581 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 BBS1Q8NFJ9 593 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 OR9A1PQ8NGU1 263 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 OR52J3Q8NH60 311 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 UBTD2Q8WUN7 234 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 PNPLA2Q96AD5 504 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 RAB3CQ96E17 227 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 DHTKD1Q96HY7 919 aaPredicted RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 RPGRIP1Q96KN7 1286 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 SPATA17Q96L03 361 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 FOPNLQ96NB1 174 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 CITED2Q99967 270 aaPredicted RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ZNF559Q9BR84 538 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 DPH7Q9BTV6 452 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 TSSK1BQ9BXA7 367 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 HCAR1Q9BXC0 346 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 GPR174Q9BXC1 333 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 NUSAP1Q9BXS6 441 aaKnown RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 LCE3DQ9BYE3 92 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 FAM129AQ9BZQ8 928 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 CCSER1Q9C0I3 900 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ANKRD2Q9GZV1 360 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 MAF1Q9H063 256 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 GANQ9H2C0 597 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 Q9H3A6 140 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 SRD5A3Q9H8P0 318 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ZNF702PQ9H963 129 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 APMAPQ9HDC9 416 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ZNF331Q9NQX6 463 aaPredicted RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 FAM212BQ9NTI7 297 aaPredicted RBP0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ANKEF1Q9NU02 776 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 C5AR2Q9P296 337 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ERVK-18Q9QC07 812 aa0.83□□□□□ -2.28
SNORD28B-201ENST00000390993 ARMCX3Q9UH62 379 aaPredicted RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms