RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 ZNF639Q9UID6 485 aa12.49□□□□□ -0.41
TRBV4-1-201ENST00000390357 MCM8Q9UJA3 840 aa12.49□□□□□ -0.41
TRBV4-1-201ENST00000390357 RIPK2O43353 540 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 ERAL1O75616 437 aaKnown RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 OR4F21O95013 312 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 EPPINO95925 133 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 HPNP05981 417 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 ENO1P06733 434 aaKnown RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 FREM3P0C091 2139 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 RHOXF2BP0C7M4 288 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 S1PR1P21453 382 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 DRD5P21918 477 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 ABCD3P28288 659 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 HMOX2P30519 316 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 CASP3P42574 277 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 PPICP45877 212 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 PRKAA2P54646 552 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 TLE4Q04727 773 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 TFF3Q07654 80 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 UNC50Q53HI1 259 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 SPIN4Q56A73 249 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 NHSL2Q5HYW2 709 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 UBAP2Q5T6F2 1119 aaKnown RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 PRAMEF20Q5VT98 475 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 DMRTC2Q8IXT2 367 aaPredicted RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 UHMK1Q8TAS1 419 aaKnown RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 L3HYPDHQ96EM0 354 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 LCORQ96JN0 433 aaPredicted RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 JSRP1Q96MG2 331 aaPredicted RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 BRINP2Q9C0B6 783 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 PPCSQ9HAB8 311 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 FARSBQ9NSD9 589 aaKnown RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 SIRT5Q9NXA8 310 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 ALKBH4Q9NXW9 302 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 BCAP29Q9UHQ4 241 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 WBP11Q9Y2W2 641 aaKnown RBP12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 LIPGQ9Y5X9 500 aa12.48□□□□□ -0.41
TRBV4-1-201ENST00000390357 MYO9AB2RTY4 2548 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 APCP25054 2843 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 MANBAO00462 879 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 PPP6CO00743 305 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 DLX3O60479 287 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 ABCB7O75027 752 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 PPM1BO75688 479 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 ABCB1P08183 1280 aaPredicted RBP12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 CELA3AP09093 270 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 CT62P0C5K7 136 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 RFPL3SP0C7P2 107 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 GPX3P22352 226 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 GDF1P27539 372 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 GCKP35557 465 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 TIMP3P35625 211 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 MASP1P48740 699 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 FBXW4P57775 412 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 DUSP8Q13202 625 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 SLC29A2Q14542 456 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 RTL6Q6ICC9 239 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 GPRIN3Q6ZVF9 776 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 CCDC71Q8IV32 467 aaPredicted RBP12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 C1orf52Q8N6N3 182 aaKnown RBP12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 CDYL2Q8N8U2 506 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 ZNF675Q8TD23 568 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 DOK4Q8TEW6 326 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 KLHL29Q96CT2 875 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 NTNG2Q96CW9 530 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 ZNF681Q96N22 645 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 RILPQ96NA2 401 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 UCK2Q9BZX2 261 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 MAT2BQ9NZL9 334 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 EHD3Q9NZN3 535 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 PSMC3IPQ9P2W1 217 aaPredicted RBP12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 FOXD3Q9UJU5 478 aaPredicted RBP12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 ZNF225Q9UK10 706 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 FAM215AQ9Y5M1 114 aa12.47□□□□□ -0.41
TRBV4-1-201ENST00000390357 NKX2-6A6NCS4 301 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 LRRC3CA6NJW4 275 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 TO15178 435 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 CBR3O75828 277 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 TRAPPC6AO75865 159 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 SLITRK5O94991 958 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 ESRRBO95718 433 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 GCAP28676 217 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 MPIP34949 423 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 FEN1P39748 380 aaKnown RBP12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 CCT5P48643 541 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 CDK9P50750 372 aaKnown RBP12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 ACSM2AQ08AH3 577 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 MGAT2Q10469 447 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 LCP2Q13094 533 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 ACSM2BQ68CK6 577 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 TIGD3Q6B0B8 471 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 VASNQ6EMK4 673 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 GALNT18Q6P9A2 607 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 OR1J4Q8NGS1 313 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 TMCO6Q96DC7 493 aa12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 METTL2AQ96IZ6 378 aaKnown RBP12.46□□□□□ -0.41
TRBV4-1-201ENST00000390357 TIMP4Q99727 224 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms