RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 RNF32Q9H0A6 362 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 DPAGT1Q9H3H5 408 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 CD93Q9NPY3 652 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 SLC39A1Q9NY26 324 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 NPTNQ9Y639 398 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 ENPP4Q9Y6X5 453 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 KCNE1BA0A087WTH5 132 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 HNRNPCL2B2RXH8 293 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 PRSS44E7EML9 344 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 NPIPB8E9PQR5 432 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 TOXO94900 526 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 OR5F1O95221 314 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 FGF2P09038 288 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 TYMPP19971 482 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 RPL35P42766 123 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 WDR5P61964 334 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 BOP1Q14137 746 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 ALG1LQ6GMV1 187 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 C17orf107Q6ZR85 190 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 DBF4BQ8NFT6 615 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 GEMIN6Q8WXD5 167 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 UROC1Q96N76 676 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 RC3H2Q9HBD1 1191 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 ISYNA1Q9NPH2 558 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 RNGTTO60942 597 aaKnown RBP13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 LPLP06858 475 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 NR2F6P10588 404 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 LCN1P31025 176 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 RGS4P49798 205 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 ZP1P60852 638 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 CAMK1Q14012 370 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 MPEG1Q2M385 716 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 WASH2PQ6VEQ5 465 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 OR8K3Q8NH51 312 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 FCRL1Q96LA6 429 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 SARGQ9BW04 601 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 ENAMQ9NRM1 1142 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 IMP3Q9NV31 184 aaKnown RBP13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 ZSCAN32Q9NX65 697 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 IGLV3-10A0A075B6K4 115 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 TCRBV16S1A1N1A0A5B0 115 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 SYN3O14994 580 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 RGS11O94810 467 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 PLATP00750 562 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 ADAP00813 363 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 ETFAP13804 333 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 CENPAP49450 140 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 EPHA4P54764 986 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 CASP9P55211 416 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 TBX4P57082 545 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 PTPRRQ15256 657 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 GSG1Q2KHT4 349 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 FAM26DQ5JW98 314 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 COX20Q5RI15 118 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 NLRC3Q7RTR2 1065 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 LKAAEAR1Q8TD35 194 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 YIPF5Q969M3 257 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 OTULINQ96BN8 352 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 DUSP26Q9BV47 211 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 GPATCH2Q9NW75 528 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 PCDHB7Q9Y5E2 793 aa13.88□□□□□ -0.19
VPS9D1-201ENST00000389386 TRBV4-1A0A0J9YWV2 114 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 CRATP43155 626 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 LBX1P52954 281 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 MVDP53602 400 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 GAS1P54826 345 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 TAF10Q12962 218 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 ARHGEF7Q14155 803 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 C10orf120Q5SQS8 335 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 PTRHD1Q6GMV3 140 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 USP45Q70EL2 814 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 TAS1R1Q7RTX1 841 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 CFAP52Q8N1V2 620 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 FAM26EQ8N5C1 309 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 ZFP41Q8N8Y5 198 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 BVESQ8NE79 360 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 BEST4Q8NFU0 473 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 FBXO32Q969P5 355 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 DPH7Q9BTV6 452 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 SORBS1Q9BX66 1292 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 CYSLTR2Q9NS75 346 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 BTNL2Q9UIR0 455 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 PCDHB1Q9Y5F3 818 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 TMEM129A0AVI4 362 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 F8W036 122 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 OAZ2O95190 189 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 GAAP10253 952 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 POU3F2P20265 443 aaPredicted RBP13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 CHI3L1P36222 383 aaPredicted RBP13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 RGRP47804 291 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 SRP9P49458 86 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 XKP51811 444 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 AKR1D1P51857 326 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 TCTN1Q2MV58 587 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 FBXL22Q6P050 247 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 PRSS55Q6UWB4 352 aaPredicted RBP13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 MON1AQ86VX9 555 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 RNF175Q8N4F7 328 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 ARIH2OSQ8N7S6 290 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 ADAMTS14Q8WXS8 1223 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms