RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 OAFQ86UD1 273 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC44A3Q8N4M1 653 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC5A8Q8N695 610 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC15A4Q8N697 577 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 PLA2G2FQ9BZM2 168 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 WDR12Q9GZL7 423 aaKnown RBP13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 RIMS3Q9UJD0 308 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 SPTA1P02549 2419 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 H0YGG7 62 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 DENRO43583 198 aaKnown RBP13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 WBP4O75554 376 aaKnown RBP13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 KRT33AO76009 404 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 HPRP00739 348 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 ARF3P61204 181 aaPredicted RBP13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 PPP2CBP62714 309 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 PPP2CAP67775 309 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 TUBA4AP68366 448 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 CSNK1G2P78368 415 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 PMS2P3Q13401 168 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 PYCR3Q53H96 274 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 FAM219BQ5XKK7 198 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 CPPED1Q9BRF8 314 aaPredicted RBP13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 MS4A8Q9BY19 250 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 ACTRT3Q9BYD9 372 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 AGPAT4Q9NRZ5 378 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 CNOT11Q9UKZ1 510 aaKnown RBP13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 SPIN1Q9Y657 262 aaPredicted RBP13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 CXorf51AA0A1B0GTR3 108 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 CCRL2O00421 344 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 KLHL18O94889 574 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 PCGF2P35227 344 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 MAGEA8P43361 318 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 PIN1Q13526 163 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF773Q6PK81 442 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 CXXC5Q7LFL8 322 aaKnown RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 METTL25Q8N6Q8 603 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 OR51A7Q8NH64 312 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 DAZLQ92904 295 aaKnown RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 RSPRY1Q96DX4 576 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 TEX10Q9NXF1 929 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 SPATA2Q9UM82 520 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 NAALAD2Q9Y3Q0 740 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 CACNA1CQ13936 2221 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 DAPL1A0PJW8 107 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 PRR23D1E9PI22 279 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 M0R3H8 397 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 ACOT8O14734 319 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 VILLO15195 856 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 HEXBP07686 556 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 PRR23D2P0DMB1 279 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 FBLP22087 321 aaKnown RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 CMPK2Q5EBM0 449 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 AGBL4Q5VU57 503 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 WDR53Q7Z5U6 358 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 CDH24Q86UP0 819 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 FAM160A2Q8N612 972 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 TMEM156Q8N614 296 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF548Q8NEK5 533 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 HDAC2Q92769 488 aaKnown RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC6A18Q96N87 628 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 CCDC115Q96NT0 180 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 NLGN3Q9NZ94 848 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 LRIT1Q9P2V4 623 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 PPIL1Q9Y3C6 166 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 LOC110117498-PIK3R3F6TDL0 507 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 HAT1O14929 419 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 ABCB7O75027 752 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 DPP6P42658 865 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 RELAQ04206 551 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 TMEM44Q2T9K0 475 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 ZFP69Q49AA0 526 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 CRTC2Q53ET0 693 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 THOC7Q6I9Y2 204 aaKnown RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 MZT2AQ6P582 158 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 LILRA2Q8N149 483 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 OR4K5Q8NGD3 323 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 ALOXE3Q9BYJ1 711 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 SIT1Q9Y3P8 196 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 NCOR1O75376 2440 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 FUOMA2VDF0 154 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 FAAHO00519 579 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 FRS3O43559 492 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 MOSPD3O75425 235 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC19A1P41440 591 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 DUSP3P51452 185 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 CDH11P55287 796 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 C9orf43Q8TAL5 461 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 PATE1Q8WXA2 126 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 S100ZQ8WXG8 99 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 MR1Q95460 341 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF300Q96RE9 604 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 CDADC1Q9BWV3 514 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 SERGEFQ9UGK8 458 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 PLCL2Q9UPR0 1127 aa13.42□□□□□ -0.26
SHROOM1-203ENST00000378679 TRPM6Q9BX84 2022 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 SMIM30A4D0T7 59 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 EFCAB9A8MZ26 197 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 C2CD4DB7Z1M9 353 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 BLOC1S5-TXNDC5H3BN57 136 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 PLOD2O00469 737 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms