RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 GINS1Q14691 196 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 HMBOX1Q6NT76 420 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 MFSD6LQ8IWD5 586 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 CHERPQ8IWX8 916 aaKnown RBP14.3□□□□□ -0.12
NPHP4-201ENST00000378156 THRSPQ92748 146 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 DTD2Q96FN9 168 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 ACPTQ9BZG2 426 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 RDH14Q9HBH5 336 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF304Q9HCX3 659 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 ENAMQ9NRM1 1142 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 HEBP1Q9NRV9 189 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 CYP17A1P05093 508 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 SELPLGQ14242 412 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF367Q7RTV3 350 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 SLC15A4Q8N697 577 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 KLHL42Q9P2K6 505 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 RREB1Q92766 1687 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 OR2B3O76000 313 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 HEXBP07686 556 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 HOXC13P31276 330 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 GABARAPL2P60520 117 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 SLC36A3Q495N2 470 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 SLC35F1Q5T1Q4 408 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 MEDAGQ5VYS4 303 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 ZSWIM9Q86XI8 627 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 ELMOD2Q8IZ81 293 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 C16orf78Q8WTQ4 265 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 EGLN2Q96KS0 407 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 TMEM246Q9BRR3 403 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 DNMT3BQ9UBC3 853 aaKnown RBP14.3□□□□□ -0.12
NPHP4-201ENST00000378156 UBQLN2Q9UHD9 624 aa14.3□□□□□ -0.12
NPHP4-201ENST00000378156 FBXO9Q9UK97 447 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-201ENST00000378156 ARNTLO00327 626 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 PLD2O14939 933 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 MLLT10P55197 1068 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 MGAT3Q09327 533 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 USF2Q15853 346 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 TMEM107Q6UX40 140 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 GAL3ST1Q99999 423 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF717Q9BY31 904 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 CSTAP01040 98 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF81P51508 661 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 ERVFC1P60507 584 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 DSG2Q14126 1118 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 SUN3Q8TAQ9 357 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 G6PC3Q9BUM1 346 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 ASPNQ9BXN1 380 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 TIGARQ9NQ88 270 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 CUEDC1Q9NWM3 386 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 LHX3Q9UBR4 397 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 CD207Q9UJ71 328 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 EXOSC1Q9Y3B2 195 aaKnown RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 EVPLQ92817 2033 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 E2F3O00716 465 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 LAMTOR5O43504 91 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 NUAK1O60285 661 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 IL7P13232 177 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 PGAM2P15259 253 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 PSMA6P60900 246 aaKnown RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 COL9A2Q14055 689 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF551Q7Z340 670 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 RTN4RL1Q86UN2 441 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 NAGSQ8N159 534 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 SLC5A8Q8N695 610 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 SLC22A12Q96S37 553 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 PTGES2Q9H7Z7 377 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 SEC61A2Q9H9S3 476 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 DCAF13Q9NV06 445 aaKnown RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 PCDHGA8Q9Y5G5 932 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 SOX30O94993 753 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 KLKB1P03952 638 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 FOSL2P15408 326 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 IL1RNP18510 177 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 CCR7P32248 378 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 SIM1P81133 766 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 ZMYND11Q15326 602 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 GRK1Q15835 563 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 TSPYL5Q86VY4 417 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 GNPDA2Q8TDQ7 276 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 MGLLQ99685 303 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 PELOQ9BRX2 385 aaKnown RBP14.29□□□□□ -0.12
NPHP4-201ENST00000378156 APOOQ9BUR5 198 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 TAS2R10Q9NYW0 307 aa14.29□□□□□ -0.12
NPHP4-201ENST00000378156 RPP14O95059 124 aaKnown RBP14.28□□□□□ -0.12
NPHP4-201ENST00000378156 F11P03951 625 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 CDK4P11802 303 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 ANXA3P12429 323 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 SLC5A2P31639 672 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 CTSCP53634 463 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 CDK5R2Q13319 367 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 RHEBQ15382 184 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 CES4AQ5XG92 561 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF627Q7L945 461 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 TMEM173Q86WV6 379 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-201ENST00000378156 FUNDC1Q8IVP5 155 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 OR4N5Q8IXE1 308 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 TEX26Q8N6G2 289 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 DAZLQ92904 295 aaKnown RBP14.28□□□□□ -0.12
NPHP4-201ENST00000378156 COQ8BQ96D53 544 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 FAIMQ9NVQ4 179 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms