RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 PDXPQ96GD0 296 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 COQ10AQ96MF6 247 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 C1QTNF6Q9BXI9 259 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 LIN7BQ9HAP6 207 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 FZD3Q9NPG1 666 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 CLN6Q9NWW5 311 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 REV1Q9UBZ9 1251 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 ICKQ9UPZ9 632 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 K7ESM1 405 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 SEMA7AO75326 666 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 MRPL28Q13084 256 aaKnown RBP13.1□□□□□ -0.31
SF1-205ENST00000377394 LEXMQ3ZCV2 418 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 SPDYE7PQ495Y7 208 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 REEP3Q6NUK4 255 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 IKBIPQ70UQ0 350 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 SLC30A8Q8IWU4 369 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 RIT1Q92963 219 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 MARC2Q969Z3 335 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 DTD2Q96FN9 168 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 OR2AG1Q9H205 316 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 TDP1Q9NUW8 608 aa13.1□□□□□ -0.31
SF1-205ENST00000377394 LRRTM2O43300 516 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 ENTPD6O75354 484 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 FGF18O76093 207 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 PIPP12273 146 aaPredicted RBP13.09□□□□□ -0.31
SF1-205ENST00000377394 ARSBP15848 533 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 CAV3P56539 151 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 UBE3AQ05086 875 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 AANATQ16613 207 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 SLC37A3Q8NCC5 494 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 LSM14AQ8ND56 463 aaKnown RBP13.09□□□□□ -0.31
SF1-205ENST00000377394 FAM46DQ8NEK8 389 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 GPR32P1Q8NGA4 272 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 TMEM203Q969S6 136 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 SLAMF7Q9NQ25 335 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 AUP1Q9Y679 476 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 FAM240BA0A1B0GVZ2 78 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 PDE9AO76083 593 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 TBX6O95947 436 aaPredicted RBP13.09□□□□□ -0.31
SF1-205ENST00000377394 POU1F1P28069 291 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 NNMTP40261 264 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 OPRD1P41143 372 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 METAP1P53582 386 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 RPS26P62854 115 aaKnown RBP13.09□□□□□ -0.31
SF1-205ENST00000377394 BTN1A1Q13410 526 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 SEC23BQ15437 767 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 LCN1P1Q5VSP4 162 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 TYW3Q6IPR3 259 aaKnown RBP13.09□□□□□ -0.31
SF1-205ENST00000377394 ARSKQ6UWY0 536 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 CEACAM20Q6UY09 585 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 SLC39A5Q6ZMH5 540 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 TRAPPC5Q8IUR0 188 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 ZNF547Q8IVP9 402 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 SLC34A3Q8N130 599 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 HORMAD2Q8N7B1 307 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 SLC38A5Q8WUX1 472 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 FBXW5Q969U6 566 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 LRIG1Q96JA1 1093 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 DEFB118Q96PH6 123 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 NLNQ9BYT8 704 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 MIEF1Q9NQG6 463 aa13.09□□□□□ -0.31
SF1-205ENST00000377394 LSM2Q9Y333 95 aaKnown RBP13.09□□□□□ -0.31
SF1-205ENST00000377394 IGFBP1P08833 259 aaPredicted RBP13.08□□□□□ -0.32
SF1-205ENST00000377394 CFL1P23528 166 aaKnown RBP13.08□□□□□ -0.32
SF1-205ENST00000377394 ACADLP28330 430 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 P2RY14Q15391 338 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 PRSS42Q7Z5A4 293 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 SLC9B2Q86UD5 537 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 ADGRF3Q8IZF5 1079 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 TAGAPQ8N103 731 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 CREB3L4Q8TEY5 395 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 AKAP1Q92667 903 aaKnown RBP eCLIP13.08□□□□□ -0.325e-7■□□□□ 10.6
SF1-205ENST00000377394 NEURL3Q96EH8 262 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 IL4I1Q96RQ9 567 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 CDCP1Q9H5V8 836 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 C11orf16Q9NQ32 467 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 PLEKHB1Q9UF11 243 aaPredicted RBP13.08□□□□□ -0.32
SF1-205ENST00000377394 NDOR1Q9UHB4 597 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 WNT6Q9Y6F9 365 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 ZNF670-ZNF695F2Z2N8 137 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 GTPBP1O00178 669 aaKnown RBP13.08□□□□□ -0.32
SF1-205ENST00000377394 SEC14L5O43304 696 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 RFPL3O75679 317 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 CXCL14O95715 111 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 HOXD4P09016 255 aaPredicted RBP13.08□□□□□ -0.32
SF1-205ENST00000377394 OSMP13725 252 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 PPM1AP35813 382 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 SNRPGP62308 76 aaKnown RBP13.08□□□□□ -0.32
SF1-205ENST00000377394 RHAGQ02094 409 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 ZNF77Q15935 545 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 PUS10Q3MIT2 529 aaKnown RBP13.08□□□□□ -0.32
SF1-205ENST00000377394 PAQR6Q6TCH4 344 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 TMIGD1Q6UXZ0 262 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 TRMT11Q7Z4G4 463 aaKnown RBP13.08□□□□□ -0.32
SF1-205ENST00000377394 WDR53Q7Z5U6 358 aaPredicted RBP13.08□□□□□ -0.32
SF1-205ENST00000377394 GDPD1Q8N9F7 314 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 OR6C4Q8NGE1 309 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 PHF21AQ96BD5 680 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 HYLS1Q96M11 299 aa13.08□□□□□ -0.32
SF1-205ENST00000377394 IL17FQ96PD4 163 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms