RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 C6orf132Q5T0Z8 1188 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.4■□□□□ 0.54
HDAC1-201ENST00000373548 DEF8Q6ZN54 512 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 USP53Q70EK8 1073 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 ZFAND2BQ8WV99 257 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 COL26A1Q96A83 441 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 STARD5Q9NSY2 213 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 NTMQ9P121 344 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 WNT16Q9UBV4 365 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 FBXL21Q9UKT6 434 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 CEP192Q8TEP8 1941 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 A0A0G2JPF8 293 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 TRBV4-1A0A0J9YWV2 114 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 A0A1W2PPC1 479 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 HNRNPCL2B2RXH8 293 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 HNRNPCL3B7ZW38 293 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 ASNA1O43681 348 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 PCDHGA12O60330 932 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 EPPINO95925 133 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 HNRNPCL4P0DMR1 293 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 ZNF770Q6IQ21 691 aaPredicted RBP18.39■□□□□ 0.53
HDAC1-201ENST00000373548 ENTHD1Q8IYW4 607 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 TAGAPQ8N103 731 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 CADM4Q8NFZ8 388 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 OR5T3Q8NGG3 340 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 OR13F1Q8NGS4 319 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 DHRS1Q96LJ7 313 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 NODALQ96S42 347 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 BTBD2Q9BX70 525 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 ACTRT3Q9BYD9 372 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 SLC24A3Q9HC58 644 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 RASSF1Q9NS23 344 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 ABCA7Q8IZY2 2146 aa18.39■□□□□ 0.53
HDAC1-201ENST00000373548 FAM227AF5H4B4 570 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 M0R3H8 397 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 TLR4O00206 839 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 GALR3O60755 368 aaPredicted RBP18.38■□□□□ 0.53
HDAC1-201ENST00000373548 WBP4O75554 376 aaKnown RBP18.38■□□□□ 0.53
HDAC1-201ENST00000373548 CPMP14384 443 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 GGT2P36268 569 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 GSSP48637 474 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 RACK1P63244 317 aaKnown RBP18.38■□□□□ 0.53
HDAC1-201ENST00000373548 SMN1Q16637 294 aaKnown RBP18.38■□□□□ 0.53
HDAC1-201ENST00000373548 DEFB110Q30KQ9 67 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 PRAMEF8Q5VWM4 474 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 PRAMEF7Q5VXH5 474 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 WDR53Q7Z5U6 358 aaPredicted RBP18.38■□□□□ 0.53
HDAC1-201ENST00000373548 ARL14Q8N4G2 192 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 AQP11Q8NBQ7 271 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 LMX1AQ8TE12 382 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 SPATA5L1Q9BVQ7 753 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 PCED1AQ9H1Q7 454 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 LIN28AQ9H9Z2 209 aaKnown RBP18.38■□□□□ 0.53
HDAC1-201ENST00000373548 ZNF556Q9HAH1 456 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 ACAD8Q9UKU7 415 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 ZNF701M0R085 212 aaPredicted RBP18.38■□□□□ 0.53
HDAC1-201ENST00000373548 UBXN7O94888 489 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 CTSBP07858 339 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 POU2F1P14859 743 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 SOX18P35713 384 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 FASLGP48023 281 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 ID2Q02363 134 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 PROX2Q3B8N5 592 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 GPR107Q5VW38 600 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 IQCHQ86VS3 1027 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 SIX5Q8N196 739 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 TMEM52Q8NDY8 209 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 SIMC1Q8NDZ2 872 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 APH1BQ8WW43 257 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 GTPBP3Q969Y2 492 aaKnown RBP18.38■□□□□ 0.53
HDAC1-201ENST00000373548 SHDQ96IW2 340 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 MS4A4EQ96PG1 132 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 CCDC3Q9BQI4 270 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 QRSL1Q9H0R6 528 aaKnown RBP18.38■□□□□ 0.53
HDAC1-201ENST00000373548 SLC38A1Q9H2H9 487 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 DUSP21Q9H596 190 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 IL21RQ9HBE5 538 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 RNF6Q9Y252 685 aa18.38■□□□□ 0.53
HDAC1-201ENST00000373548 CYR61O00622 381 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 TRMUO75648 421 aaKnown RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 SEC14L2O76054 403 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 GASTP01350 101 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 CDH3P22223 829 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 ELAVL4P26378 380 aaKnown RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 DCKP27707 260 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 KRT20P35900 424 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 SLC35A2P78381 396 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 RPL6Q02878 288 aaKnown RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 SEC23BQ15437 767 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 FGD3Q5JSP0 725 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 GTF2IRD2BQ6EKJ0 949 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 MFSD12Q6NUT3 480 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 GTF2IRD2Q86UP8 949 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 OR2L13Q8N349 312 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 C19orf47Q8N9M1 422 aaKnown RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 C12orf43Q96C57 262 aaKnown RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 SLC35A4Q96G79 324 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 LHPPQ9H008 270 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 MIR1-1HGQ9H1L0 117 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 GIN1Q9NXP7 522 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms