RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 C19orf53Q9UNZ5 99 aaPredicted RBP16.42■□□□□ 0.22
SSBP3-203ENST00000371319 SAMHD1Q9Y3Z3 626 aaKnown RBP16.42■□□□□ 0.22
SSBP3-203ENST00000371319 TMEM184BQ9Y519 407 aaPredicted RBP16.42■□□□□ 0.22
SSBP3-203ENST00000371319 A0A087WV62 115 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 TGFBR3LH3BV60 316 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 PCDHGA12O60330 932 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 GNAO1P09471 354 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 NT5EP21589 574 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 CNR2P34972 360 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 HOXD12P35452 270 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 XCR1P46094 333 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 GCGRP47871 477 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 AVPR1BP47901 424 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 KCNJ5P48544 419 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 CRISP3P54108 245 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 SQSTM1Q13501 440 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 PUM1Q14671 1186 aaKnown RBP eCLIP16.41■□□□□ 0.22
SSBP3-203ENST00000371319 LAPTM4AQ15012 233 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 ZIK1Q3SY52 487 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-203ENST00000371319 PRAMEF8Q5VWM4 474 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 PRAMEF7Q5VXH5 474 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 CDC73Q6P1J9 531 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 DGAT2L6Q6ZPD8 337 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 USP51Q70EK9 711 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 WDR53Q7Z5U6 358 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-203ENST00000371319 KMT5CQ86Y97 462 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 METTL27Q8N6F8 245 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-203ENST00000371319 FAM181AQ8N9Y4 354 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 OR2I1PQ8NGU4 316 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 ADAMTS18Q8TE60 1221 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 FBXL20Q96IG2 436 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 RDH12Q96NR8 316 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 COL21A1Q96P44 957 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 ZNF347Q96SE7 839 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 REEP1Q9H902 201 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 BATF3Q9NR55 127 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 GIN1Q9NXP7 522 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 SCOCQ9UIL1 159 aa16.41■□□□□ 0.22
SSBP3-203ENST00000371319 A0A0G2JPF8 293 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 BLACEA4D250 179 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 HNRNPCL2B2RXH8 293 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 HNRNPCL3B7ZW38 293 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 PLOD3O60568 738 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 DNAJB5O75953 348 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 SLITRK5O94991 958 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 FESP07332 822 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 CT62P0C5K7 136 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 SLC35E2P0CK97 266 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 HNRNPCL4P0DMR1 293 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 ACP2P11117 423 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 FOLR1P15328 257 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 RRM2P31350 389 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 ARL4DP49703 201 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 IGLV3-21P80748 117 aaPredicted RBP16.4■□□□□ 0.22
SSBP3-203ENST00000371319 GNA13Q14344 377 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 HEPHL1Q6MZM0 1159 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 TMPRSS9Q7Z410 1059 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 OR4C15Q8NGM1 316 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 OR1L3Q8NH93 324 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 CEP76Q8TAP6 659 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 CTHRC1Q96CG8 243 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 MMABQ96EY8 250 aaPredicted RBP16.4■□□□□ 0.22
SSBP3-203ENST00000371319 TOR3AQ9H497 397 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 ZNF768Q9H5H4 540 aaKnown RBP16.4■□□□□ 0.22
SSBP3-203ENST00000371319 CUTCQ9NTM9 273 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 EXD2Q9NVH0 621 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 CLDN16Q9Y5I7 305 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 ENPP4Q9Y6X5 453 aa16.4■□□□□ 0.22
SSBP3-203ENST00000371319 CPED1A4D0V7 1026 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 A8MU76 341 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 H0YAE9 185 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 H0YIG0 161 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 J3KTA2 159 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 HS6ST1O60243 411 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 CTNSO60931 367 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 OR2B3O76000 313 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 H6PDO95479 791 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 ALBP02768 609 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 ETS2P15036 469 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 ITGA2P17301 1181 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 NELFEP18615 380 aaKnown RBP16.39■□□□□ 0.21
SSBP3-203ENST00000371319 YAP1P46937 504 aaKnown RBP16.39■□□□□ 0.21
SSBP3-203ENST00000371319 GTF2A1P52655 376 aaPredicted RBP16.39■□□□□ 0.21
SSBP3-203ENST00000371319 KCNC4Q03721 635 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 GPAT3Q53EU6 434 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 ISLR2Q6UXK2 745 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 ZNF605Q86T29 641 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 ZNF595Q8IYB9 648 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 SLC16A11Q8NCK7 471 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 TRNT1Q96Q11 434 aaKnown RBP16.39■□□□□ 0.21
SSBP3-203ENST00000371319 BTBD2Q9BX70 525 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 PDP1Q9P0J1 537 aaPredicted RBP16.39■□□□□ 0.21
SSBP3-203ENST00000371319 LIPT1Q9Y234 373 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 SH3GLB1Q9Y371 365 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 TESMINQ9Y4I5 508 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 PCDHGB3Q9Y5G1 929 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 LYVE1Q9Y5Y7 322 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 CCDC88CQ9P219 2028 aa16.39■□□□□ 0.21
SSBP3-203ENST00000371319 HYAL3O43820 417 aaPredicted RBP16.38■□□□□ 0.21
SSBP3-203ENST00000371319 SERPINB7O75635 380 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms