RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 IMPA1P29218 277 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 CNR2P34972 360 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 ALDH9A1P49189 494 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 VSX2P58304 361 aaPredicted RBP15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 SP140Q13342 867 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 SLBPQ14493 270 aaKnown RBP eCLIP15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 GPR139Q6DWJ6 353 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 ASTLQ6HA08 431 aaPredicted RBP15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 MED27Q6P2C8 311 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 TNFAIP8L2Q6P589 184 aaPredicted RBP15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 COMMD6Q7Z4G1 85 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 CFAP206Q8IYR0 622 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 GPR137Q96N19 417 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 HHIPQ96QV1 700 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 WRAP53Q9BUR4 548 aaKnown RBP15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 UBQLN2Q9UHD9 624 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 SLC9A8Q9Y2E8 581 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 IGLV3-16A0A075B6K0 115 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 A0A1W2PPL8 197 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 TRBC2A0A5B9 178 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 SLC30A4O14863 429 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 TPST2O60704 377 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 AOC2O75106 756 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 LEFTY1O75610 366 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 APOC3P02656 99 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 CHMP24386 653 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 CSNK1DP48730 415 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 RORCP51449 518 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 POLR2LP62875 67 aaKnown RBP15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 KCNC3Q14003 757 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 RPS26P11Q5JNZ5 115 aaPredicted RBP15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 GRHL2Q6ISB3 625 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 ASB18Q6ZVZ8 466 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 BCDIN3DQ7Z5W3 292 aaKnown RBP15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 ZNF740Q8NDX6 193 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 KLHL6Q8WZ60 621 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 BTNL2Q9UIR0 455 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 SH2B3Q9UQQ2 575 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 PRELID3BQ9Y3B1 194 aa15.14■□□□□ 0.01
SYNCRIP-202ENST00000369622 TRBV23-1A0A0A0MS06 115 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 SLC22A23A1A5C7 686 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 LEFTY2O00292 366 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 GASTP01350 101 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 ZNF8P17098 575 aaPredicted RBP15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 ADGRG3Q86Y34 549 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 RASGEF1AQ8N9B8 481 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.13■□□□□ 0.015e-7■■■■□ 19.6
SYNCRIP-202ENST00000369622 PTP4A1Q93096 173 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 CXorf58Q96LI9 332 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 NPAS1Q99742 590 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 REEP4Q9H6H4 257 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 MIEF1Q9NQG6 463 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 SDHAF2Q9NX18 166 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 DNAJC27Q9NZQ0 273 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 EXO1Q9UQ84 846 aaKnown RBP15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 KCNMB2Q9Y691 235 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 DOCK6Q96HP0 2047 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 CCNB2O95067 398 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 FGL2Q14314 439 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 DUSP6Q16828 381 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 HMGN2P46Q86SG4 172 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 MS4A15Q8N5U1 240 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 ECHDC3Q96DC8 303 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 OPALINQ96PE5 141 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 MED28Q9H204 178 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 MGAT4BQ9UQ53 548 aa15.13■□□□□ 0.01
SYNCRIP-202ENST00000369622 H0YIV9 168 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 SLC16A5O15375 505 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 CXCL3P19876 107 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 ZNF763Q0D2J5 394 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 SPIN4Q56A73 249 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 TRIM40Q6P9F5 258 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 MAMSTRQ6ZN01 415 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 TRMT11Q7Z4G4 463 aaKnown RBP15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 KIAA0907Q7Z7F0 614 aaPredicted RBP15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 TRAPPC5Q8IUR0 188 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 Q8N402 240 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 BEST4Q8NFU0 473 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 OR9Q1Q8NGQ5 310 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 CHTF18Q8WVB6 975 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 ATOH1Q92858 354 aaPredicted RBP15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 UFD1Q92890 307 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 RAB8BQ92930 207 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 CHST8Q9H2A9 424 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 SPG21Q9NZD8 308 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 C5AR2Q9P296 337 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 KLHL42Q9P2K6 505 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 AUP1Q9Y679 476 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 CFAP20Q9Y6A4 193 aaKnown RBP15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 A0A1W2PRB8 838 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 ANKDD1BA6NHY2 528 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 LRG1P02750 347 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 INHAP05111 366 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 TBPL1P62380 186 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 ZNF655Q8N720 491 aaPredicted RBP15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 SRFBP1Q8NEF9 429 aaKnown RBP15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 HMX1Q9NP08 348 aaPredicted RBP15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 ACER3Q9NUN7 267 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 CLN6Q9NWW5 311 aa15.12■□□□□ 0.01
SYNCRIP-202ENST00000369622 KCMF1Q9P0J7 381 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms