RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 PLOD3O60568 738 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 CDC123O75794 336 aaPredicted RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 BMP10O95393 424 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 CBX7O95931 251 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 RECKO95980 971 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 CAPNS1P04632 268 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 ITGB2P05107 769 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 HMGN2P05204 90 aaKnown RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 TFPTP0C1Z6 253 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 ZNF28P17035 718 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 MAOAP21397 527 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 PPP2R1BP30154 601 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 GPC1P35052 558 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 RORAP35398 523 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 MAP3K8P41279 467 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 MAGEA8P43361 318 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 CLDN6P56747 220 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 HSD17B7P56937 341 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 PCBP3P57721 371 aaKnown RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 AP2B1P63010 937 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 RHAGQ02094 409 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 SLC34A1Q06495 639 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 RBBP4Q09028 425 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 FUT5Q11128 374 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 MAP4K2Q12851 820 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 ILKQ13418 452 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 TP53BP2Q13625 1128 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 SPDYE7PQ495Y7 208 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 AASDHQ4L235 1098 aaPredicted RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 TRMT12Q53H54 448 aaKnown RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 LCN10Q6JVE6 187 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 ZFP1Q6P2D0 407 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 TNFAIP8L2Q6P589 184 aaPredicted RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 ENPP6Q6UWR7 440 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 RBM44Q6ZP01 1051 aaKnown RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 CCDC80Q76M96 950 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 TMEM102Q8N9M5 508 aaPredicted RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 C11orf65Q8NCR3 313 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 AGBL5Q8NDL9 886 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 NUP43Q8NFH3 380 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 OR56A1Q8NGH5 318 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 HOXB13Q92826 284 aaPredicted RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 RAB8BQ92930 207 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 STMN2Q93045 179 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 COL26A1Q96A83 441 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 MOAP1Q96BY2 351 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 MAGED4Q96JG8 741 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 NSMCE2Q96MF7 247 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 OR1F2PQ96R84 312 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 CTRCQ99895 268 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 PKP2Q99959 881 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 ALOXE3Q9BYJ1 711 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 TRIM15Q9C019 465 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 OR51I1Q9H343 314 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 RAD21L1Q9H4I0 556 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 CXorf21Q9HAI6 301 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 ZNF304Q9HCX3 659 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 FBXO8Q9NRD0 319 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 PRTFDC1Q9NRG1 225 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 ZCCHC3Q9NUD5 404 aaKnown RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 ARMC1Q9NVT9 282 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 PTGFRNQ9P2B2 879 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 NDOR1Q9UHB4 597 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 RIMS3Q9UJD0 308 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 RARRES3Q9UL19 164 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 FAF1Q9UNN5 650 aaPredicted RBP8.87□□□□□ -0.99
VTA1-201ENST00000367621 SRPK3Q9UPE1 567 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 AP4S1Q9Y587 144 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 KCNE3Q9Y6H6 103 aa8.87□□□□□ -0.99
VTA1-201ENST00000367621 PMS2P1A4D2B8 440 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 B4E171 279 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 HRKO00198 91 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 CNOT3O75175 753 aaKnown RBP8.86□□□□□ -0.99
VTA1-201ENST00000367621 SCRG1O75711 98 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 PRKD3O94806 890 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 SERPINA1P01009 418 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 CLPSP04118 112 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 SEMG1P04279 462 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 GPIP06744 558 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 OR12D1P0DN82 309 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 UMPSP11172 480 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 MATN1P21941 496 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 FBLP22087 321 aaKnown RBP8.86□□□□□ -0.99
VTA1-201ENST00000367621 IL10P22301 178 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 CSTF2P33240 577 aaKnown RBP eCLIP8.86□□□□□ -0.99
VTA1-201ENST00000367621 KDELR2P33947 212 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 GALNSP34059 522 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 TSPAN7P41732 249 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 STT3AP46977 705 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 FOXL2P58012 376 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 DSTNP60981 165 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 CDK6Q00534 326 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 SCARB2Q14108 478 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 IL11RAQ14626 422 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 ZNF630Q2M218 657 aaPredicted RBP8.86□□□□□ -0.99
VTA1-201ENST00000367621 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
VTA1-201ENST00000367621 IQCCQ4KMZ1 466 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 VWA2Q5GFL6 755 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 MTX3Q5HYI7 312 aa8.86□□□□□ -0.99
VTA1-201ENST00000367621 HMBOX1Q6NT76 420 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms