RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 HNF1AP20823 631 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SHROOM1Q2M3G4 852 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SLC36A3Q495N2 470 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 LIPJQ5W064 366 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 GPR155Q7Z3F1 870 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF467Q7Z7K2 595 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ZER1Q7Z7L7 766 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TCTEX1D1Q8N7M0 179 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 OR4K1Q8NGD4 311 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 MALSU1Q96EH3 234 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SEPHS2Q99611 448 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CMAHPQ9Y471 501 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 MT-ND6P03923 174 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 LINC00032P0C843 101 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 EBLN1P0CF75 366 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PNMTP11086 282 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 RABIFP47224 123 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CX3CR1P49238 355 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PPP1R3BQ86XI6 285 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CCDC116Q8IYX3 515 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 HSD17B11Q8NBQ5 300 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SELENOMQ8WWX9 145 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PDGFDQ9GZP0 370 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 UBQLN3Q9H347 655 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ANKRD28O15084 1053 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PMS2P2O95744 297 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 KHDC1Q4VXA5 237 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 BBS1Q8NFJ9 593 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 LEFTY2O00292 366 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 KCNQ2O43526 872 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ALPPP05187 535 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TAS2R30P59541 319 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 IGDCC3Q8IVU1 814 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 FAM71E2Q8N5Q1 922 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 GABARAPL3Q9BY60 117 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 KCNH6Q9H252 994 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 DMAC2Q9NW81 257 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 FBXL2Q9UKC9 423 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TIMM13Q9Y5L4 95 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 F5H6K3 240 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 KLRC2P26717 231 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM30BQ3MIR4 351 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 C10orf120Q5SQS8 335 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 RTL4Q6ZR62 310 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 MCEEQ96PE7 176 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 WWTR1Q9GZV5 400 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 COQ10BQ9H8M1 238 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 MAP3K4Q9Y6R4 1608 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CLDN9O95484 217 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 FBP1P09467 338 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ARHGAP15Q53QZ3 475 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SNX29P2Q8IUI4 249 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CMTM7Q96FZ5 175 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CCM2Q9BSQ5 444 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SPATA6Q9NWH7 488 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TCRBV3S1A0A5B6 114 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 IL5P05113 134 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 GTDC1Q4AE62 458 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 THOC6Q86W42 341 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CSNK1EP49674 416 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PRKXP51817 358 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 RAP1BP61224 184 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 RAP1AP62834 184 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 BAXQ07812 192 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SERINC3Q13530 473 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 NEDD8Q15843 81 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CLEC9AQ6UXN8 241 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 DHRS7Q9Y394 339 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 RIMS1Q86UR5 1692 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CYB5R3P00387 301 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 BUD31P41223 144 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ZP2Q05996 745 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 WSCD2Q2TBF2 565 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF529Q6P280 563 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 MISPQ8IVT2 679 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SLC5A11Q8WWX8 675 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 GPR88Q9GZN0 384 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 FLRT2O43155 660 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 MAGEA12P43365 314 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TNK1Q13470 666 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SLC16A13Q7RTY0 426 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ACBD7Q8N6N7 88 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 OR2A12Q8NGT7 310 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ARNT2Q9HBZ2 717 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SLC6A5Q9Y345 797 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 MMP20O60882 483 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 GSG1Q2KHT4 349 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 BTNL3Q6UXE8 466 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM173Q86WV6 379 aaPredicted RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 SLC47A1Q96FL8 570 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 MID1IP1Q9NPA3 183 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 SSTR2P30874 369 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 DECR1Q16698 335 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 SLC39A12Q504Y0 691 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 LRRC73Q5JTD7 316 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 FBXO47Q5MNV8 452 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 FAM171BQ6P995 826 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 ECHDC2Q86YB7 292 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 OR8J2Q8NGG1 315 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 TAS2R10Q9NYW0 307 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms