RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ABCF3Q9NUQ8 709 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 GNPTGQ9UJJ9 305 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF148Q9UQR1 794 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 SCN2AQ99250 2005 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 FBN2P35556 2912 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 IGLV3-12A0A075B6K2 115 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 IGHV1-45A0A0A0MS14 117 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 A0A0A6YYC8 382 aaPredicted RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 IGHV3-20A0A0C4DH32 117 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 OR2A25A4D2G3 310 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 MIF4GDA9UHW6 222 aaKnown RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 GOLGA8KD6RF30 607 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 GOLGA8TH3BQL2 631 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 I3L1I5 382 aaPredicted RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 LIASO43766 372 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 NIPSNAP2O75323 286 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 WISP2O76076 250 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 BMP10O95393 424 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 WDPCPO95876 746 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 SERPINA7P05543 415 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 HEXBP07686 556 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 F7P08709 466 aaPredicted RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 EGR1P18146 543 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 PTMSP20962 102 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 DUSP1P28562 367 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 HTR1EP28566 365 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 FMO4P31512 558 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 STIP1P31948 543 aaKnown RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 RPA3P35244 121 aaPredicted RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 TTPAP49638 278 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 EFNA3P52797 238 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 TERF1P54274 439 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 MAT1AQ00266 395 aaKnown RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 ART3Q13508 389 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 SEC23BQ15437 767 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 OASLQ15646 514 aaKnown RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 CTSL3PQ5NE16 218 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 C10orf25Q5T742 122 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 HIBCHQ6NVY1 386 aaPredicted RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 LRRC8BQ6P9F7 803 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 CES3Q6UWW8 571 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 TMEM207Q6UWW9 146 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 NEK10Q6ZWH5 1172 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 ADCK2Q7Z695 626 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 PAQR7Q86WK9 346 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 ANKRD13BQ86YJ7 626 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 PLD3Q8IV08 490 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 SYCE1Q8N0S2 351 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 CSNK1A1LQ8N752 337 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 AMER3Q8N944 861 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 CCDC89Q8N998 374 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 PPFIBP2Q8ND30 876 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 HMGCLL1Q8TB92 370 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 HAS2Q92819 552 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 PMM1Q92871 262 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 FOPNLQ96NB1 174 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 SIGLEC11Q96RL6 698 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 DESI2Q9BSY9 194 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 MRPS30Q9NP92 439 aaKnown RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 SPATA7Q9P0W8 599 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 GALPQ9UBC7 116 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 SEC14L3Q9UDX4 400 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 TAC3Q9UHF0 121 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 PCYOX1Q9UHG3 505 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 CDC14AQ9UNH5 594 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 CRYL1Q9Y2S2 319 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 MRPS2Q9Y399 296 aaKnown RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 KLK4Q9Y5K2 254 aa4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 SIRT4Q9Y6E7 314 aaPredicted RBP4.86□□□□□ -1.63
RNU4-4P-201ENST00000364588 IGKV1-8A0A0C4DH67 115 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 OR5H15A6NDH6 313 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 OR2W5A6NFC9 320 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 A8MUI8 341 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 ARHGEF33A8MVX0 844 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 P2RX6O15547 441 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 PRPF4O43172 522 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 VPS26AO75436 327 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 VAPBO95292 243 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 SYF2O95926 243 aaKnown RBP4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 CRYABP02511 175 aaKnown RBP4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 ANXA5P08758 320 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 COX6B1P14854 86 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 RPS3P23396 243 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 RPL22P35268 128 aaKnown RBP4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 SLC26A3P40879 764 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 CA7P43166 264 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF75DP51815 510 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 BASP1P80723 227 aaKnown RBP4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF91Q05481 1191 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF33BQ06732 778 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 KIF5AQ12840 1032 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 PMS2P11Q13670 270 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 KCNJ11Q14654 390 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 INAQ16352 499 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 KLHL38Q2WGJ6 581 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 BTBD16Q32M84 506 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 ANKRD20A4Q4UJ75 823 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 ACSBG2Q5FVE4 666 aa4.85□□□□□ -1.63
RNU4-4P-201ENST00000364588 SEL1L2Q5TEA6 688 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms