RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 TCF4P15884 667 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 IDSP22304 550 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 HTR1EP28566 365 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 MC5RP33032 325 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 MTIF2P46199 727 aaKnown RBP0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 RXRGP48443 463 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 METAP1P53582 386 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 UCP2P55851 309 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZIC1Q15915 447 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 LINC00483Q53H64 154 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 DDI2Q5TDH0 399 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 SNRNP48Q6IEG0 339 aaKnown RBP0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 ARSKQ6UWY0 536 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 C9orf40Q8IXQ3 194 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZNF100Q8IYN0 542 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 SLC22A8Q8TCC7 542 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 BIRC7Q96CA5 298 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 LINC00477Q96M19 166 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 TSNARE1Q96NA8 513 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZNF558Q96NG5 402 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 CHCHD6Q9BRQ6 235 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 PLEK2Q9NYT0 353 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 RFNGQ9Y644 331 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 CDH10Q9Y6N8 788 aa0.69□□□□□ -2.3
RNU6-238P-201ENST00000363313 GPR179Q6PRD1 2367 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 PPIAL4EA0A075B759 164 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 A0A096LNJ9 63 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 A0A0A6YYD4 124 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 PPIAL4CA0A0B4J2A2 164 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ANKDD1BA6NHY2 528 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 PPIAL4DF5H284 164 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 CCDC188H7C350 402 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 RIPK2O43353 540 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 FCGR3BO75015 233 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 CBR3O75828 277 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ANXA9O76027 345 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 PGM3O95394 542 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 PCCAP05165 728 aaPredicted RBP0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ALPIP09923 528 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 PPIAL4FP0DN26 164 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 UCP1P25874 307 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 CD1BP29016 333 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 HSPA4P34932 840 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 OR3A1P47881 315 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 LHX2P50458 406 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 MNAT1P51948 309 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 RPL32P62910 135 aaKnown RBP0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 BCL2L1Q07817 233 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 SLAQ13239 276 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 GGTLC2Q14390 218 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZNF630Q2M218 657 aaPredicted RBP0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 CCDC70Q6NSX1 233 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ANKRD46Q86W74 232 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 SIX6OS1Q8N1H7 587 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 FAM71E2Q8N5Q1 922 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 PI4KAP1Q8N8J0 262 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 C7orf33Q8WU49 177 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 CHCHD10Q8WYQ3 142 aaPredicted RBP0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 PCED1BQ96HM7 432 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 MBOAT4Q96T53 435 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ALG9Q9H6U8 611 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 MINDY3Q9H8M7 445 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ABCB8Q9NUT2 735 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZNF586Q9NXT0 402 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 CHORDC1Q9UHD1 332 aaPredicted RBP0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 LCMT1Q9UIC8 334 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZNF229Q9UJW7 825 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZNF225Q9UK10 706 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 EMCNQ9ULC0 261 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 RPH3AQ9Y2J0 694 aaPredicted RBP0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 SNX8Q9Y5X2 465 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 UBIAD1Q9Y5Z9 338 aa0.68□□□□□ -2.3
RNU6-238P-201ENST00000363313 NPIPA5A0A0B4J1W7 369 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 ILVBLA1L0T0 632 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 A6NDX4 124 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 MEI4A8MW99 385 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 NPIPA5E9PKD4 350 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 ADAM20O43506 726 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 TBL1XO60907 577 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 PGK1P00558 417 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 RETP07949 1114 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 GSTA2P09210 222 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 NR2F1P10589 423 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 CCNCP24863 283 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 NAGLUP54802 743 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 CDKL1Q00532 357 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 OTUD4Q01804 1114 aaKnown RBP0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 GABPAQ06546 454 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 P2RY14Q15391 338 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 CD226Q15762 336 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 CDO1Q16878 200 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 WSCD2Q2TBF2 565 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 FAM205BPQ63HN1 556 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 DCLRE1AQ6PJP8 1040 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 FRA10AC1Q70Z53 315 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 C6orf223Q8N319 242 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZNF709Q8N972 641 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 Q8N9W7 124 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 FNDC8Q8TC99 324 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 NEIL2Q969S2 332 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms