RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 RBBP4Q09028 425 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 FCHO2Q0JRZ9 810 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 RAB30Q15771 203 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 PLPP4Q5VZY2 271 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 FAAH2Q6GMR7 532 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 C16orf87Q6PH81 154 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF554Q86TJ5 538 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 LRRTM4Q86VH4 590 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF547Q8IVP9 402 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 METTL4Q8N3J2 472 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 OR4K1Q8NGD4 311 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 OR52N2Q8NGI0 321 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 OR9A1PQ8NGU1 263 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 TOE1Q96GM8 510 aaKnown RBP6.92□□□□□ -1.3
CLCN3-202ENST00000360642 SPNS1Q9H2V7 528 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 MYNNQ9NPC7 610 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 AKIP1Q9NQ31 210 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 RAPGEFL1Q9UHV5 662 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 TDRKHQ9Y2W6 561 aaKnown RBP6.92□□□□□ -1.3
CLCN3-202ENST00000360642 MYO15AQ9UKN7 3530 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 C17orf113A0A1B0GUU1 675 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 KIAA0355O15063 1070 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 C6orf47O95873 294 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 HLA-EP13747 358 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 ETFAP13804 333 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 APEX1P27695 318 aaKnown RBP6.92□□□□□ -1.3
CLCN3-202ENST00000360642 IDUAP35475 653 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 CCR3P51677 355 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 MC1RQ01726 317 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 NR1D2Q14995 579 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 PAGE2BQ5JRK9 111 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 UBE2UQ5VVX9 321 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 VASNQ6EMK4 673 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 TRIM74Q86UV6 250 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 IGFN1Q86VF2 1251 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 CENPSQ8N2Z9 138 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 WDR48Q8TAF3 677 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 CPT1CQ8TCG5 803 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 C16orf78Q8WTQ4 265 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 SLC5A11Q8WWX8 675 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 CIDECQ96AQ7 238 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-202ENST00000360642 TAMM41Q96BW9 452 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 SLC35A5Q9BS91 424 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 BTBD2Q9BX70 525 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 RASSF1Q9NS23 344 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 THSD1Q9NS62 852 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 PLCXD1Q9NUJ7 323 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 ATAD3AQ9NVI7 634 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 FKBP14Q9NWM8 211 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 RNF6Q9Y252 685 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 SLC27A6Q9Y2P4 619 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 PMF1-BGLAPU3KQ54 211 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 LRRK1Q38SD2 2015 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 SPEGQ15772 3267 aa6.92□□□□□ -1.3
CLCN3-202ENST00000360642 OR2A25A4D2G3 310 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 A8MVJ9 347 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SLC9A3R1O14745 358 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 ADAMDEC1O15204 470 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 FAM20BO75063 409 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 GBAP04062 536 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 FOSL1P15407 271 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 ITGB7P26010 798 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SERPINF1P36955 418 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TGFBR2P37173 567 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 CRATP43155 626 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 DPTQ07507 201 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 MESP2Q0VG99 397 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 FADDQ13158 208 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 PPIGQ13427 754 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 CRB2Q5IJ48 1285 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TRIM48Q8IWZ4 208 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 NDNFQ8TB73 568 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 DYNC2LI1Q8TCX1 351 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 WFIKKN2Q8TEU8 576 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 DNASE1L2Q92874 299 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 MTERF3Q96E29 417 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 FEVQ99581 238 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 PITHD1Q9GZP4 211 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 OR2AG1Q9H205 316 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 OR51B5Q9H339 312 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 DPEP2Q9H4A9 486 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 LMCD1Q9NZU5 365 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SLC23A1Q9UHI7 598 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 CLDN24A6NM45 220 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 CLDN25C9JDP6 229 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TNFRSF11BO00300 401 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 KPNA3O00505 521 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 HOXC11O43248 304 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 FADS2O95864 444 aaKnown RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 PRNPP04156 253 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 GGT2P36268 569 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 RPL3P39023 403 aaKnown RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 LIMS1P48059 325 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 HMGA2P52926 109 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 UCP3P55916 312 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SCARB2Q14108 478 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 GCNT6Q5T4J0 391 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 C9orf64Q5T6V5 341 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 Q6ZPB1 254 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 P2RY8Q86VZ1 359 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms