RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 DUSP7Q16829 419 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 UAP1L1Q3KQV9 507 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 COLEC12Q5KU26 742 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 TMEM236Q5W0B7 351 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 C11orf74Q86VG3 221 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 SLC44A2Q8IWA5 706 aaPredicted RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 AMER2Q8N7J2 671 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 OR9Q2Q8NGE9 314 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 ZNF675Q8TD23 568 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 PROX1Q92786 737 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 RPL3LQ92901 407 aaKnown RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 RAB8BQ92930 207 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 UCN3Q969E3 161 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 C17orf62Q9BQA9 187 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 GPR174Q9BXC1 333 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 CDCA4Q9BXL8 241 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 TAS2R7Q9NYW3 318 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 SELENONQ9NZV5 590 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 ISPDA4D126 451 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 LRIT2A6NDA9 550 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 METTL15A6NJ78 407 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 OR52A4PA6NMU1 304 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 HMGN4O00479 90 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 PPM1DO15297 605 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 PRICKLE3O43900 615 aaPredicted RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 CNOT3O75175 753 aaKnown RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 ADAP00813 363 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 PIPP12273 146 aaPredicted RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 CCT3P49368 545 aaKnown RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 ADPRHP54922 357 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 ABATP80404 500 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 MAPK11Q15759 364 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 RPE65Q16518 533 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 ZNF770Q6IQ21 691 aaPredicted RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 SLC36A4Q6YBV0 504 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 ZNF793Q6ZN11 406 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 USP30Q70CQ3 517 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 BTLAQ7Z6A9 289 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 TAGAPQ8N103 731 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 UTP15Q8TED0 518 aaKnown RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 APOBEC4Q8WW27 367 aaKnown RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 RASSF5Q8WWW0 418 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 SLC35G5Q96KT7 338 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 NEURL2Q9BR09 285 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 FAIM2Q9BWQ8 316 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 ALOXE3Q9BYJ1 711 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 NXF2Q9GZY0 626 aaKnown RBP13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 KLHL31Q9H511 634 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 FZD3Q9NPG1 666 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 CLN6Q9NWW5 311 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 FTSJ1Q9UET6 329 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 KLK4Q9Y5K2 254 aa13.48□□□□□ -0.25
NIPAL3-203ENST00000358028 HEATR5BQ9P2D3 2071 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 BOLA2-SMG1P6H3BVE0 249 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 HAT1O14929 419 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 MFN2O95140 757 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 ADORA3P0DMS8 318 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 C21orf33P30042 268 aaPredicted RBP13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 MAT2AP31153 395 aaKnown RBP13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 DHPSP49366 369 aaPredicted RBP13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 CRISP1P54107 249 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 SMIM11AP58511 58 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 ST3GAL4Q11206 333 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 SFSWAPQ12872 951 aaKnown RBP13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 TP53BP2Q13625 1128 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 PUM1Q14671 1186 aaKnown RBP eCLIP13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 TIMM50Q3ZCQ8 353 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 NDUFAF5Q5TEU4 345 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 FAM20CQ8IXL6 584 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 ZBTB8BQ8NAP8 495 aaPredicted RBP13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 AQP11Q8NBQ7 271 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 GPR32P1Q8NGA4 272 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 SCARF2Q96GP6 870 aaPredicted RBP13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 DHRS1Q96LJ7 313 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 HSPA12BQ96MM6 686 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 GLIPR2Q9H4G4 154 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 SERHL2Q9H4I8 314 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 PRDM8Q9NQV8 689 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 GPR83Q9NYM4 423 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 EHD3Q9NZN3 535 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 PNMA8BQ9ULN7 279 aaPredicted RBP13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 TMCC3Q9ULS5 477 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 MGAT4BQ9UQ53 548 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 NCKAP1Q9Y2A7 1128 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 PCDHGA3Q9Y5H0 932 aa13.47□□□□□ -0.25
NIPAL3-203ENST00000358028 DSPPQ9NZW4 1301 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3DA0A087WVF3 549 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3IA0A087WXS9 549 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3EA0A087X179 549 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3KA0A087X1G2 549 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3FA6NER0 549 aaPredicted RBP13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3LB9A6J9 549 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 SERPINB7O75635 380 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 SEMA4FO95754 770 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 STATHP02808 62 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 STSP08842 583 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3HP0C7X1 549 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms