RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 DHDHQ9UQ10 334 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 A0A1B0GVT2 93 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 A0A1W2PP55 124 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 MEGF11A6BM72 1044 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 HEPACAM2A8MVW5 462 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 ANHXE9PGG2 379 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 CSN2P05814 226 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 STSP08842 583 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 TYRP1P17643 537 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 NTSR1P30989 418 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 VEGFBP49765 207 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 CLRN1P58418 232 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 CXCR4P61073 352 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 TRA2BP62995 288 aaKnown RBP11.19□□□□□ -0.62
COL9A1-202ENST00000357250 FGL1Q08830 312 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 NFATC3Q12968 1075 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 TMEM69Q5SWH9 247 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 SCD5Q86SK9 330 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 OR4K5Q8NGD3 323 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 XKR8Q9H6D3 395 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 HEBP1Q9NRV9 189 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 RDH8Q9NYR8 311 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 ACSL6Q9UKU0 697 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 NENFQ9UMX5 172 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 GRXCR1A8MXD5 290 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 KHNYNO15037 678 aaKnown RBP11.19□□□□□ -0.62
COL9A1-202ENST00000357250 CLEC3AO75596 197 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 RP2O75695 350 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 UCHL1P09936 223 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 NUDT1P36639 197 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 MAP2K4P45985 399 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 SELENOWP63302 87 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 HSD11B2P80365 405 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 PLCXD2Q0VAA5 305 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 DNASE1L3Q13609 305 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 RUNX3Q13761 415 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 ELOAQ14241 798 aaKnown RBP11.19□□□□□ -0.62
COL9A1-202ENST00000357250 RGNQ15493 299 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 RAB12Q6IQ22 244 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 PNCKQ6P2M8 343 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 DGLUCYQ7Z3D6 616 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 ANKRD13BQ86YJ7 626 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 RBM12BQ8IXT5 1001 aaKnown RBP11.19□□□□□ -0.62
COL9A1-202ENST00000357250 GORASP2Q9H8Y8 452 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 RXFP3Q9NSD7 469 aa11.19□□□□□ -0.62
COL9A1-202ENST00000357250 BORCS7-ASMTA0A0B4J1R7 106 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 I3L521 148 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 TSPAN4O14817 238 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 PYCR1P32322 319 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 DCTP40126 519 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 GDI2P50395 445 aaKnown RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 MRPL49Q13405 166 aaKnown RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 SERTAD2Q14140 314 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 GRM7Q14831 915 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 TBRG1Q3YBR2 411 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 SLC22A10Q63ZE4 541 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 TMEM225Q6GV28 225 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 TRNP1Q6NT89 227 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 TRIM73Q86UV7 250 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 ZNF283Q8N7M2 679 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 ASCC1Q8N9N2 400 aaKnown RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 OR13J1Q8NGT2 312 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 NELL2Q99435 816 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 NPLQ9BXD5 320 aaPredicted RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 EPHA6Q9UF33 1036 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 USP54Q70EL1 1684 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 DDX60LQ5H9U9 1706 aaKnown RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 OR6C74A6NCV1 312 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 TTC34A8MYJ7 566 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 ADRB3P13945 408 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 MLLT1Q03111 559 aaPredicted RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 MICAQ29983 383 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 CLLU1OSQ5K130 101 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 KLHDC8AQ8IYD2 350 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 C12orf76Q8N812 135 aaPredicted RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 PAPD5Q8NDF8 572 aaKnown RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 STRADBQ9C0K7 418 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 IL26Q9NPH9 171 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 LOC285095A0A1B0GVY8 99 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 AURKAO14965 403 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 APOL3O95236 402 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 STATHP02808 62 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 SPARCP09486 303 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 LAMP1P11279 417 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 FBLP22087 321 aaKnown RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 PTGS2P35354 604 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 TAZQ16635 292 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 RAB41Q5JT25 222 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 APCDD1Q8J025 514 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 SLC22A8Q8TCC7 542 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 NAA11Q9BSU3 229 aaPredicted RBP11.18□□□□□ -0.62
COL9A1-202ENST00000357250 IRF2BPLQ9H1B7 796 aa11.18□□□□□ -0.62
COL9A1-202ENST00000357250 PCDH17O14917 1159 aa11.17□□□□□ -0.62
COL9A1-202ENST00000357250 POLR1CO15160 346 aaPredicted RBP11.17□□□□□ -0.62
COL9A1-202ENST00000357250 ETFAP13804 333 aa11.17□□□□□ -0.62
COL9A1-202ENST00000357250 RORAP35398 523 aa11.17□□□□□ -0.62
COL9A1-202ENST00000357250 HTR6P50406 440 aa11.17□□□□□ -0.62
COL9A1-202ENST00000357250 RIDAP52758 137 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms