RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TGFBR3Q03167 851 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 UPP1Q16831 310 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 PIGGQ5H8A4 983 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 KIAA1614Q5VZ46 1190 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 LCTLQ6UWM7 567 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 C2CD4AQ8NCU7 369 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TRUB1Q8WWH5 349 aaKnown RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 UCN3Q969E3 161 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TSACCQ96A04 125 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 OR5B12Q96R08 314 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ATG5Q9H1Y0 275 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 AJAP1Q9UKB5 411 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 AGAP5A6NIR3 686 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 C1GALT1C1LP0DN25 315 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 OR12D1P0DN82 309 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 LCN1P31025 176 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 DAP3P51398 398 aaKnown RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 RRADP55042 308 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SCGB2A2Q13296 93 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 PTPRCAPQ14761 206 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 C3orf38Q5JPI3 329 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 AWAT2Q6E213 333 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 TRIM46Q7Z4K8 759 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 CCDC71LQ8N9Z2 235 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 OR52P1PQ8NH57 321 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 S100PBPQ96BU1 408 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 RRNAD1Q96FB5 475 aaKnown RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 DPH7Q9BTV6 452 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 CPEB1Q9BZB8 566 aaKnown RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 OARD1Q9Y530 152 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 PRAMEF26H0Y7S4 382 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 PRKD3O94806 890 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 UQCRC1P31930 480 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 CAMK2DQ13557 499 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 UGT3A2Q3SY77 523 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 MANEAQ5SRI9 462 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 KDELC1Q6UW63 502 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 ENPP6Q6UWR7 440 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 OR11L1Q8NGX0 322 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 MEPEQ9NQ76 525 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLC2A6Q9UGQ3 507 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 HIF3AQ9Y2N7 669 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 DLGAP1O14490 977 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLC16A8O95907 504 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 S1PR4O95977 384 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 G6PDP11413 515 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 CD46P15529 392 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 GDF1P27539 372 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 LEPRP48357 1165 aaKnown RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 GPX6P59796 221 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 C6orf141Q5SZD1 244 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLC27A4Q6P1M0 643 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 GALNT10Q86SR1 603 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 COMTD1Q86VU5 262 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 TBC1D15Q8TC07 691 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 DCBLD2Q96PD2 775 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SMOQ99835 787 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 TTTY10Q9BZA0 68 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 TPSD1Q9BZJ3 242 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 HIF1ANQ9NWT6 349 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 GDE1Q9NZC3 331 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 MYH9P35579 1960 aaKnown RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 ARFGEF2Q9Y6D5 1785 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 PROS1P07225 676 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLC10A3P09131 477 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SHC2P98077 582 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 ANKDD1AQ495B1 522 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 OSTM1Q86WC4 334 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 CMTM1Q8IZ96 169 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 OR6C4Q8NGE1 309 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 OR51G2Q8NGK0 314 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 OR5J2Q8NH18 312 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 AURKBQ96GD4 344 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLC17A9Q9BYT1 436 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 RPF2Q9H7B2 306 aaKnown RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 COQ10BQ9H8M1 238 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 ZFP57Q9NU63 452 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 RNF6Q9Y252 685 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 KCTD3Q9Y597 815 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 PLCH1Q4KWH8 1693 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 FAM159BA6NKW6 160 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 AXIN1O15169 862 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SIX3O95343 332 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 GBAP04062 536 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 IL32P24001 234 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLC5A2P31639 672 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 MAGEA6P43360 314 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 ADAM17P78536 824 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 C1orf61Q13536 156 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 HACD2Q6Y1H2 254 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLC39A5Q6ZMH5 540 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLC16A9Q7RTY1 509 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 OR5L1Q8NGL2 311 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 NAT6Q93015 286 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 MSLNLQ96KJ4 702 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 POTEKPQ9BYX7 375 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 DCSTAMPQ9H295 470 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 C2orf42Q9NWW7 574 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 DNAJC27Q9NZQ0 273 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 A0A096LPI6 279 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms