RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 LNX2Q8N448 690 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 PHOSPHO1Q8TCT1 267 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 OVCA2Q8WZ82 227 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 TXNDC15Q96J42 360 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 NIPAL2Q9H841 368 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 IGSF5Q9NSI5 407 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 GLTPQ9NZD2 209 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 LRFN1Q9P244 771 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 SETD1AO15047 1707 aaKnown RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 E2F3O00716 465 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 KCNE1P15382 129 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 CHATP28329 748 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 INHBEP58166 350 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 CREB3L2Q70SY1 520 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR13F1Q8NGS4 319 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 HAVCR2Q8TDQ0 301 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 SETD7Q8WTS6 366 aaKnown RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 SUSD3Q96L08 255 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 CMKLR1Q99788 373 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 APMAPQ9HDC9 416 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 DUS2Q9NX74 493 aaKnown RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 SIX4Q9UIU6 781 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF254O75437 659 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 BMP4P12644 408 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 CD9P21926 228 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 SELENOWP63302 87 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF33BQ06732 778 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 FIP1L1Q6UN15 594 aaKnown RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 CFAP77Q6ZQR2 320 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 LINC00299Q6ZSB3 139 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 C6orf120Q7Z4R8 191 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 LRRC28Q86X40 367 aaPredicted RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR4K5Q8NGD3 323 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ANKRD26Q9UPS8 1709 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ACP5P13686 325 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 CLCNKAP51800 687 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM214AQ32MH5 1076 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 PGM2L1Q6PCE3 622 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC29A4Q7RTT9 530 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 NRROSQ86YC3 692 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 B3GAT2Q9NPZ5 323 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 WASH6PQ9NQA3 447 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 C19orf12Q9NSK7 152 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 LOC102723532A0A0G2JNH3 316 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF705FA8MVS1 300 aaPredicted RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 UPK3BL1B0FP48 263 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 UPK3BL2E5RIL1 263 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 CCL16O15467 120 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 RNF13O43567 381 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 H2BFMP0C1H6 154 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF705DP0CH99 300 aaPredicted RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF705BP0CI00 300 aaPredicted RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 SSTR4P31391 388 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 GSTM4Q03013 218 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 APOFQ13790 326 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR51A7Q8NH64 312 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 PNO1Q9NRX1 252 aaKnown RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 DBF4BQ8NFT6 615 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR52B6Q8NGF0 335 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 POC1BQ8TC44 478 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ADAMTS16Q8TE57 1224 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR6C2Q9NZP2 312 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 KAT6AQ92794 2004 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 STMND1H3BQB6 276 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 PDGFAP04085 211 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 KCNQ1P51787 676 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 CCL23P55773 120 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 HSD11B2P80365 405 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 FLYWCH1Q4VC44 716 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 KIAA1211LQ6NV74 962 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 VITQ6UXI7 678 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 NRARPQ7Z6K4 114 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 DCAF4L2Q8NA75 395 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR4K14Q8NGD5 310 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR52P1PQ8NH57 321 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC25A44Q96H78 314 aaPredicted RBP12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC2A13Q96QE2 648 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR14A2Q96R54 314 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 SMOQ99835 787 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 NAA50Q9GZZ1 169 aaKnown RBP12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 FANCFQ9NPI8 374 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 MRC1P22897 1456 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 CACNA1FO60840 1977 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ARNTLO00327 626 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 TNFRSF10BO14763 440 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 SOCS5O75159 536 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 AKAIN1P0CW23 69 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 RAB40BQ12829 278 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 CPZQ66K79 652 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.12□□□□□ -0.473e-6■■■□□ 15.9
SYNCRIP-201ENST00000355238 C12orf45Q8N5I9 185 aaPredicted RBP12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 HCAR2Q8TDS4 363 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 MYLIPQ8WY64 445 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 CDC6Q99741 560 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 DPEP2Q9H4A9 486 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 THSD1Q9NS62 852 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms