RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 GPALPP1Q8IXQ4 340 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 RCOR2Q8IZ40 523 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 OR2T11Q8NH01 316 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 NANPQ8TBE9 248 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 C18orf25Q96B23 403 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF707Q96C28 371 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ROPN1BQ9BZX4 212 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ATG10Q9H0Y0 220 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 FARSBQ9NSD9 589 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 POLKQ9UBT6 870 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SLC12A6Q9UHW9 1150 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CHMP2BQ9UQN3 213 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TMED5Q9Y3A6 229 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 AP4B1Q9Y6B7 739 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CNTLNQ9NXG0 1405 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SYNRGQ9UMZ2 1314 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 IGLV5-37A0A075B6J1 123 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SERTM2A0A1B0GWG4 89 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GOLGA8OA6NCC3 632 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GOLGA8NF8WBI6 632 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PRRG1O14668 218 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 B4GALT2O60909 372 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PABPC4LP0CB38 370 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 MARK3P27448 753 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GLIPR1P48060 266 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 FNTAP49354 379 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 XGP55808 180 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 RPS27AP62979 156 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 EEF1A2Q05639 463 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SRSF1Q07955 248 aaKnown RBP eCLIP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 MXD4Q14582 209 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 P2RY6Q15077 328 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SPANXN4Q5MJ08 99 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PDZK1Q5T2W1 519 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 C8orf82Q6P1X6 216 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CYS1Q717R9 158 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 P4HA3Q7Z4N8 544 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF75CPQ92670 426 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ADIPOR1Q96A54 375 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 NEURL2Q9BR09 285 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 BICC1Q9H694 974 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ANKRA2Q9H9E1 313 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GPN2Q9H9Y4 310 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GDF3Q9NR23 364 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SMARCAL1Q9NZC9 954 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 VPS54Q9P1Q0 977 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 IL36RNQ9UBH0 155 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 EMCNQ9ULC0 261 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 VDAC3Q9Y277 283 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GPR179Q6PRD1 2367 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GCN1Q92616 2671 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 EPG5Q9HCE0 2579 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 A0A087WZ39 114 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 C15orf38-AP3S2A0A0A6YYH1 394 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 HELTA6NFD8 242 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 NCF1BA6NI72 391 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF716A6NP11 495 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM110-MUSTN1A8MSY1 372 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 NCF1CA8MVU1 366 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 MEI4A8MW99 385 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 DFNA5O60443 496 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CLDN1O95832 211 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TOMM40O96008 361 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CA1P00915 261 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GAPDHP04406 335 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ASGR1P07306 291 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ANXA4P09525 319 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ALOX5P09917 674 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF735P0CB33 412 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ANPEPP15144 967 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 MAT2AP31153 395 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CEACAM8P31997 349 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PEX3P56589 373 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 LIPEQ05469 1076 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 KLC1Q07866 573 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 XKR6Q5GH73 641 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CAPRIN2Q6IMN6 1127 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CD164L2Q6UWJ8 174 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 DBX2Q6ZNG2 339 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 Q6ZRG5 221 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PTAR1Q7Z6K3 402 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PHLDB2Q86SQ0 1253 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PIGZQ86VD9 579 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SFR1Q86XK3 245 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PHC2Q8IXK0 858 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 OFCC1Q8IZS5 231 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 OR52K2Q8NGK3 314 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM37Q8WXS4 190 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 NT5C3BQ969T7 300 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 VPS35Q96QK1 796 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 S1PR3Q99500 378 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CDCA3Q99618 268 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CCDC77Q9BR77 488 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 MIS12Q9H081 205 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GANQ9H2C0 597 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 IL1RL2Q9HB29 575 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 HACD3Q9P035 362 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 EPHA6Q9UF33 1036 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 KIAA1257Q9ULG3 409 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms