RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 CCNL2Q96S94 520 aaPredicted RBP3.52□□□□□ -1.85
RNF38-203ENST00000353739 SPNS1Q9H2V7 528 aa3.52□□□□□ -1.85
RNF38-203ENST00000353739 GLIPR2Q9H4G4 154 aa3.52□□□□□ -1.85
RNF38-203ENST00000353739 MTHFD2LQ9H903 347 aaPredicted RBP3.52□□□□□ -1.85
RNF38-203ENST00000353739 SLC6A20Q9NP91 592 aa3.52□□□□□ -1.85
RNF38-203ENST00000353739 H2AFY2Q9P0M6 372 aaPredicted RBP3.52□□□□□ -1.85
RNF38-203ENST00000353739 ACSL6Q9UKU0 697 aa3.52□□□□□ -1.85
RNF38-203ENST00000353739 HCN2Q9UL51 889 aa3.52□□□□□ -1.85
RNF38-203ENST00000353739 GSTK1Q9Y2Q3 226 aa3.52□□□□□ -1.85
RNF38-203ENST00000353739 TBC1D3DA0A087WVF3 549 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TBC1D3IA0A087WXS9 549 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TBC1D3EA0A087X179 549 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 FEZF1A0PJY2 475 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 METTL15A6NJ78 407 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TBC1D3LB9A6J9 549 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 HAT1O14929 419 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 B4GAT1O43505 415 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 PRICKLE3O43900 615 aaPredicted RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 SH3BGRLO75368 114 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 GCM2O75603 506 aaPredicted RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 KLHL18O94889 574 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 AIFM1O95831 613 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TBC1D3HP0C7X1 549 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 GALP22466 123 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 RPL10P27635 214 aaKnown RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 CD97P48960 835 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 BLKP51451 505 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 BCAP31P51572 246 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TSPAN31Q12999 210 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TARDBPQ13148 414 aaKnown RBP eCLIP3.51□□□□□ -1.853e-7■■■■■ 28.9
RNF38-203ENST00000353739 ITGADQ13349 1161 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 GANABQ14697 944 aaKnown RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZNHIT3Q15649 155 aaPredicted RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 MPEG1Q2M385 716 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 FAM214AQ32MH5 1076 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ARHGAP11BQ3KRB8 267 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 MINDY4Q4G0A6 757 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 SPANXN2Q5MJ10 180 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TBC1D3CQ6IPX1 549 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZNF770Q6IQ21 691 aaPredicted RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 C1orf94Q6P1W5 598 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZNF852Q6ZMS4 543 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 PLEKHM3Q6ZWE6 761 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 PAQR7Q86WK9 346 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TBC1D3Q8IZP1 549 aaPredicted RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 FAM26EQ8N5C1 309 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 PSD4Q8NDX1 1056 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 PROKR2Q8NFJ6 384 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 B3GNT7Q8NFL0 401 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 OR2A1Q8NGT9 310 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 NDNFQ8TB73 568 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 APOBEC4Q8WW27 367 aaKnown RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 GTPBP3Q969Y2 492 aaKnown RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 LRRC3BQ96PB8 259 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 C17orf62Q9BQA9 187 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 KXD1Q9BQD3 176 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZNF559Q9BR84 538 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 MED18Q9BUE0 208 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 NAA50Q9GZZ1 169 aaKnown RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 DSN1Q9H410 356 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 MRPS18AQ9NVS2 196 aaKnown RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZFR2Q9UPR6 939 aaKnown RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 ASB4Q9Y574 426 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZFC3H1O60293 1989 aaKnown RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 A0A0J9YY10 115 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 AGAP5A6NIR3 686 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 PROM1O43490 865 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 UPK1BO75841 260 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 VIPP01282 170 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 GASTP01350 101 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TSPAN19P0C672 248 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 GAAP10253 952 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ACP2P11117 423 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 LAMP2P13473 410 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 FPR3P25089 353 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 SLC15A1P46059 708 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 PCYT1AP49585 367 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 RGS6P49758 472 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 BMXP51813 675 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 BDH1Q02338 343 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 POU4F2Q12837 409 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ILF3Q12906 894 aaKnown RBP eCLIP3.51□□□□□ -1.85
RNF38-203ENST00000353739 DSG2Q14126 1118 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZNF425Q6IV72 752 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 HEPHL1Q6MZM0 1159 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZNF730Q6ZMV8 503 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZNF438Q7Z4V0 828 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 IGFN1Q86VF2 1251 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZNF619Q8N2I2 560 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 ZNF784Q8NCA9 323 aaPredicted RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 OR52J3Q8NH60 311 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 UFD1Q92890 307 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 SIPA1Q96FS4 1042 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 OR7D2Q96RA2 312 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TSSK6Q9BXA6 273 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 POLMQ9NP87 494 aaPredicted RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 FGF20Q9NP95 211 aaPredicted RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 MBNL1Q9NR56 388 aaKnown RBP3.51□□□□□ -1.85
RNF38-203ENST00000353739 GPATCH2Q9NW75 528 aa3.51□□□□□ -1.85
RNF38-203ENST00000353739 TRNAU1APQ9NX07 287 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms