RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 RBM45Q8IUH3 476 aaKnown RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF683Q8IZ20 524 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 C2orf69Q8N8R5 385 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 RPLP0P6Q8NHW5 317 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 FATE1Q969F0 183 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PPCDCQ96CD2 204 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 MS4A3Q96HJ5 214 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF582Q96NG8 517 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 TEFMQ96QE5 360 aaKnown RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SECISBP2Q96T21 854 aaKnown RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 TBX5Q99593 518 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 C12orf57Q99622 126 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 TINF2Q9BSI4 451 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 MAGEH1Q9H213 219 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SLCO1C1Q9NYB5 712 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 GULP1Q9UBP9 304 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 REV1Q9UBZ9 1251 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 NOD1Q9Y239 953 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 FCF1Q9Y324 198 aaKnown RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF98A6NK75 572 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 KRBOX1C9JBD0 128 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 TNFRSF10BO14763 440 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PI15O43692 258 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 GMDSO60547 372 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 LALBAP00709 142 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 HK1P19367 917 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 RAB3AP20336 220 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 CD9P21926 228 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 GKP32189 559 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 MTNR1AP48039 350 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 LIM2P55344 173 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 BAMBIQ13145 260 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PLA1AQ53H76 456 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 IER5LQ5T953 404 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 FAM198BQ6UWH4 519 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 TMEM91Q6ZNR0 172 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 RRM2BQ7LG56 351 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 OR4F15Q8NGB8 312 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 RADILQ96JH8 1075 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 KCNJ15Q99712 375 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 MED18Q9BUE0 208 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 GHITMQ9H3K2 345 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 DLL4Q9NR61 685 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 NLGN3Q9NZ94 848 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PTTG3PQ9NZH4 202 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 NUBP2Q9Y5Y2 271 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 AUP1Q9Y679 476 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SLC22A23A1A5C7 686 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 INPPL1O15357 1258 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SGTAO43765 313 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SOD1P00441 154 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 TFP02787 698 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 EIF4EP06730 217 aaKnown RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 POU3F2P20265 443 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 AHCYP23526 432 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 AOAHP28039 575 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 RPL9P32969 192 aaKnown RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 GPR85P60893 370 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SCRN3Q0VDG4 424 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 NAE1Q13564 534 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 FGL2Q14314 439 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF169Q14929 603 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 ARHGAP15Q53QZ3 475 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 C3orf38Q5JPI3 329 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 GPRC6AQ5T6X5 926 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 ACSM5Q6NUN0 579 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 NLRC3Q7RTR2 1065 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 IQCHQ86VS3 1027 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SIAH3Q8IW03 269 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 STPG2Q8N412 459 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 OXR1Q8N573 874 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 MEIOBQ8N635 442 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 OR52N2Q8NGI0 321 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SCMH1Q96GD3 660 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PAWRQ96IZ0 340 aaKnown RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 FCRL4Q96PJ5 515 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 FNDC11Q9BVV2 318 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 OSGEPL1Q9H4B0 414 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 NANSQ9NR45 359 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 H2AFY2Q9P0M6 372 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 NFKBIL1Q9UBC1 381 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 BTNL2Q9UIR0 455 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PRG3Q9Y2Y8 225 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 CKAP5Q14008 2032 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SIX6O95475 246 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 JUPP14923 745 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 GJA1P17302 382 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 IDSP22304 550 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SLC16A1P53985 500 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 BEX3Q00994 111 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 MLLT1Q03111 559 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 PTSQ03393 145 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 DSC1Q08554 894 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 MAP4K2Q12851 820 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SNTB2Q13425 540 aaKnown RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF630Q2M218 657 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ARTNQ5T4W7 220 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 TTC9BQ8N6N2 239 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 OR2T4Q8NH00 348 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 TEX47Q8TBZ9 253 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms