RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 UBE3DQ7Z6J8 389 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 OR6T1Q8NGN1 323 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 XAGE5Q8WWM1 108 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 OTUB2Q96DC9 234 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 KATNB1Q9BVA0 655 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 PLA2G12AQ9BZM1 189 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 TAS2R7Q9NYW3 318 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 PRKAB1Q9Y478 270 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 TMCC2O75069 709 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 ALPPP05187 535 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 PPP2R1BP30154 601 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 CCR8P51685 355 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 ZNF628Q5EBL2 1059 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 PDZK1Q5T2W1 519 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 MRGPREQ86SM8 312 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 SYT14Q8NB59 555 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 SIMC1Q8NDZ2 872 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 BBS10Q8TAM1 723 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 TMEM163Q8TC26 289 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 TFGQ92734 400 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-202ENST00000352393 KCNK12Q9HB15 430 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 ADAM29Q9UKF5 820 aa23.14■■□□□ 1.29
CPNE1-202ENST00000352393 A0A0B4J293 547 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 IRGMA1A4Y4 181 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 PRODHO43272 600 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 FGF19O95750 216 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 CHRM5P08912 532 aaPredicted RBP23.13■■□□□ 1.29
CPNE1-202ENST00000352393 PSMB5P28074 263 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 RPA4Q13156 261 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 SNAPC1Q16533 368 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 PPP2R2DQ66LE6 453 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 SLC36A4Q6YBV0 504 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 SLC39A5Q6ZMH5 540 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 RGMAQ96B86 450 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 RNF31Q96EP0 1072 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 RNFT2Q96EX2 444 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 DEPDC7Q96QD5 511 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 GLIPR2Q9H4G4 154 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 NT5DC2Q9H857 520 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 BCL2L10Q9HD36 194 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 TRPC4Q9UBN4 977 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 TBX21Q9UL17 535 aa23.13■■□□□ 1.29
CPNE1-202ENST00000352393 LZTS3O60299 673 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-202ENST00000352393 GSTM3P21266 225 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 KHKP50053 298 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 ST8SIA6P61647 398 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 DAB2P98082 770 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 FUT5Q11128 374 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 ZNF730Q6ZMV8 503 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 SZRD1Q7Z422 152 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 AMER3Q8N944 861 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 TP53I13Q8NBR0 393 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-202ENST00000352393 AMDHD1Q96NU7 426 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 MENTQ9BUN1 341 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 ANKRA2Q9H9E1 313 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 MUC22E2RYF6 1773 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-202ENST00000352393 PTPRSQ13332 1948 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 CENPBD1B2RD01 187 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 SLC30A4O14863 429 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 PLA2G10O15496 165 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 LRRTM2O43300 516 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 APOL3O95236 402 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 FHP07954 510 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 RHOP08100 348 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 CHRM4P08173 479 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 MYL9P24844 172 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 MAN2A2P49641 1150 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 RACK1P63244 317 aaKnown RBP23.12■■□□□ 1.29
CPNE1-202ENST00000352393 UBE3AQ05086 875 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 MINDY4Q4G0A6 757 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 GPAT3Q53EU6 434 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 OR5K2Q8NHB8 316 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 WFIKKN2Q8TEU8 576 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 AP3S1Q92572 193 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 TTYH2Q9BSA4 534 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 EGLN3Q9H6Z9 239 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 DDX31Q9H8H2 851 aaKnown RBP23.12■■□□□ 1.29
CPNE1-202ENST00000352393 ZCCHC3Q9NUD5 404 aaKnown RBP23.12■■□□□ 1.29
CPNE1-202ENST00000352393 TMEM98Q9Y2Y6 226 aa23.12■■□□□ 1.29
CPNE1-202ENST00000352393 DENND4AQ7Z401 1863 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 H7BY64 318 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 GPC1P35052 558 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 CD200R1LQ6Q8B3 271 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 C12orf40Q86WS4 652 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 OR52P1PQ8NH57 321 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 UFD1Q92890 307 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 C1GALT1C1Q96EU7 318 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 PRAP1Q96NZ9 151 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 DEFB118Q96PH6 123 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 RERGLQ9H628 205 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 RNF121Q9H920 327 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 EXOSC1Q9Y3B2 195 aaKnown RBP23.11■■□□□ 1.29
CPNE1-202ENST00000352393 A0A0A6YYD5 115 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 A0A1W2PPV9 198 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 MYCP01106 439 aaPredicted RBP23.11■■□□□ 1.29
CPNE1-202ENST00000352393 ADRB3P13945 408 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 FGF9P31371 208 aaPredicted RBP23.11■■□□□ 1.29
CPNE1-202ENST00000352393 GABRA5P31644 462 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 MLLT3P42568 568 aaPredicted RBP23.11■■□□□ 1.29
CPNE1-202ENST00000352393 TRA2BP62995 288 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms