RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PAMR1Q6UXH9 720 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 VRK3Q8IV63 474 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 PLA2G15Q8NCC3 412 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 OR52P1PQ8NH57 321 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 CHTF18Q8WVB6 975 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 AKAP1Q92667 903 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMAD9-201ENST00000350148 ZNF559Q9BR84 538 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 PINK1Q9BXM7 581 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 ZNF696Q9H7X3 374 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 KCNK12Q9HB15 430 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 ANKRD33BA6NCL7 494 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 GLOD5A6NK44 160 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 SLC22A1O15245 554 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 HCN1O60741 890 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 STATHP02808 62 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 GP1BBP13224 206 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 RORAP35398 523 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 STAT5AP42229 794 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 GPR143P51810 404 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 S100A12P80511 92 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 BNIP3Q12983 259 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 SLC5A12Q1EHB4 618 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 CACTIN-AS1Q8N1I8 211 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 DTWD1Q8N5C7 304 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 WDR48Q8TAF3 677 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 TMEM234Q8WY98 164 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 TMEM19Q96HH6 336 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 CPPED1Q9BRF8 314 aaPredicted RBP11.53□□□□□ -0.56
SMAD9-201ENST00000350148 INPP5KQ9BT40 448 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 VAPAQ9P0L0 249 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 PCDHA9Q9Y5H5 950 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 ABCB7O75027 752 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 CER1O95813 267 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 RPLP0P05388 317 aaKnown RBP11.53□□□□□ -0.56
SMAD9-201ENST00000350148 ACVR2AP27037 513 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 MRPL19P49406 292 aaKnown RBP11.53□□□□□ -0.56
SMAD9-201ENST00000350148 CASP9P55211 416 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 BICRALQ6AI39 1079 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 ZCCHC12Q6PEW1 402 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 DNM1P34Q6PK57 102 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 TMEM107Q6UX40 140 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 SGPP1Q9BX95 441 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 ZDHHC5Q9C0B5 715 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 KLHL1Q9NR64 748 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 PADI2Q9Y2J8 665 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 TDRD15B5MCY1 1934 aaKnown RBP11.53□□□□□ -0.56
SMAD9-201ENST00000350148 LDOC1O95751 146 aaPredicted RBP11.52□□□□□ -0.56
SMAD9-201ENST00000350148 CRYZL1O95825 349 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 SERPINA3P01011 423 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 PRKAR1AP10644 381 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 CLUP10909 449 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 RYKP34925 604 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 MS4A2Q01362 244 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 TUBB3Q13509 450 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 MCATQ8IVS2 390 aaKnown RBP11.52□□□□□ -0.56
SMAD9-201ENST00000350148 ADGRG5Q8IZF4 528 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 MFSD2AQ8NA29 543 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 OR2L3Q8NG85 312 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 SARDHQ9UL12 918 aa11.52□□□□□ -0.56
SMAD9-201ENST00000350148 FBP2O00757 339 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 CTSLP07711 333 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 NPPBP16860 134 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 PSPHP78330 225 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 PTRH1Q86Y79 214 aaKnown RBP11.52□□□□□ -0.57
SMAD9-201ENST00000350148 LAS2Q8IYD9 372 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 SLC7A5P1Q8MH63 180 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 NPLQ9BXD5 320 aaPredicted RBP11.52□□□□□ -0.57
SMAD9-201ENST00000350148 CLDN25C9JDP6 229 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 AKAP8O43823 692 aaKnown RBP11.52□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF888P0CJ79 500 aaPredicted RBP11.52□□□□□ -0.57
SMAD9-201ENST00000350148 ETFAP13804 333 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 GABRA3P34903 492 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.52□□□□□ -0.57
SMAD9-201ENST00000350148 ETFBKMTQ8IXQ9 262 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 OR2T11Q8NH01 316 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 JPH3Q8WXH2 748 aaPredicted RBP11.52□□□□□ -0.57
SMAD9-201ENST00000350148 UFD1Q92890 307 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 COMMD9Q9P000 198 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 PCDHGA4Q9Y5G9 962 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 TP53I11O14683 189 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 HAT1O14929 419 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 BCAT2O15382 392 aaPredicted RBP11.52□□□□□ -0.57
SMAD9-201ENST00000350148 POU2F1P14859 743 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 MYF6P23409 242 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 PYHIN1Q6K0P9 492 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 GID4Q8IVV7 300 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 KLHL36Q8N4N3 616 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 FCRL4Q96PJ5 515 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 ABCD2Q9UBJ2 740 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 SIT1Q9Y3P8 196 aa11.52□□□□□ -0.57
SMAD9-201ENST00000350148 A8MU76 341 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 PEX12O00623 359 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 LATO43561 262 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 AK4P27144 223 aaPredicted RBP11.51□□□□□ -0.57
SMAD9-201ENST00000350148 PYDC2Q56P42 97 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ZC3H14Q6PJT7 736 aaKnown RBP11.51□□□□□ -0.57
SMAD9-201ENST00000350148 PLET1Q6UQ28 207 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF420Q8TAQ5 688 aaPredicted RBP11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF671Q8TAW3 534 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF304Q9HCX3 659 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms