RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ABCG2Q9UNQ0 655 aa20.1■□□□□ 0.81
TSPAN3-202ENST00000346495 LIPT1Q9Y234 373 aa20.1■□□□□ 0.81
TSPAN3-202ENST00000346495 TMEM184BQ9Y519 407 aaPredicted RBP20.1■□□□□ 0.81
TSPAN3-202ENST00000346495 IGHV5-10-1A0A0J9YXX1 117 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 MYOCOSA0A1B0GUC4 107 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 PRAMEF27A3QJZ7 478 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 C7orf72A4D263 438 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 G3V2T6 193 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 DSCR3O14972 297 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 SERPINB7O75635 380 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 ALAS2P22557 587 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 SOX18P35713 384 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 HSD17B7P56937 341 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 MED21Q13503 144 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 TRMT12Q53H54 448 aaKnown RBP20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 ST13P4Q8IZP2 240 aaPredicted RBP20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 OR5K1Q8NHB7 308 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 ADAMTS15Q8TE58 950 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 RASSF5Q8WWW0 418 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 GEMIN6Q8WXD5 167 aaKnown RBP20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 OTUB1Q96FW1 271 aaPredicted RBP20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 TREX2Q9BQ50 279 aaPredicted RBP20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 OSBPL11Q9BXB4 747 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 EXD2Q9NVH0 621 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 PCDHGB2Q9Y5G2 931 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 SPTBP11277 2137 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 EI24O14681 340 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 DENRO43583 198 aaKnown RBP20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 DPM1O60762 260 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 MFN2O95140 757 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 XCR1P46094 333 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 MGAT2Q10469 447 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 BIKQ13323 160 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 MED25Q71SY5 747 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 CTHRC1Q96CG8 243 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 SPATA5L1Q9BVQ7 753 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 GIN1Q9NXP7 522 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 CALML5Q9NZT1 146 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 AP4B1Q9Y6B7 739 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 MAU2Q9Y6X3 613 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 NCOR1O75376 2440 aa20.09■□□□□ 0.81
TSPAN3-202ENST00000346495 A0A0G2JPF8 293 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 HNRNPCL2B2RXH8 293 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 HNRNPCL3B7ZW38 293 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 GALR2O43603 387 aaPredicted RBP20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 E2F6O75461 281 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 HNRNPCL4P0DMR1 293 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 GRK6P43250 576 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 FUT5Q11128 374 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 MAP4K2Q12851 820 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 ERV3-1Q14264 604 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 GPAT3Q53EU6 434 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 SWT1Q5T5J6 900 aaKnown RBP20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 ZCCHC12Q6PEW1 402 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 SMYD1Q8NB12 490 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 CCDC74BQ96LY2 380 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 OR1F2PQ96R84 312 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 GFM1Q96RP9 751 aaKnown RBP20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 BTBD2Q9BX70 525 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 ALOXE3Q9BYJ1 711 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 THSD1Q9NS62 852 aa20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 DHCR7Q9UBM7 475 aaKnown RBP20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 GPC6Q9Y625 555 aaPredicted RBP20.08■□□□□ 0.8
TSPAN3-202ENST00000346495 CDC123O75794 336 aaPredicted RBP20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 CHRM4P08173 479 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 ETS2P15036 469 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 ITGA2P17301 1181 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 CD247P20963 164 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 DCTP40126 519 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 DAG1Q14118 895 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 DSG2Q14126 1118 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 SERTAD2Q14140 314 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 IQCCQ4KMZ1 466 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 PLA2G2CQ5R387 149 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 TCEAL6Q6IPX3 200 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 C16orf62Q7Z3J2 963 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 STK32CQ86UX6 486 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 HIPK1Q86Z02 1210 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 VWA5B2Q8N398 1253 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 TCEAL3Q969E4 200 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 SLC35A4Q96G79 324 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 RBM18Q96H35 190 aaKnown RBP20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 COL21A1Q96P44 957 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 DGAT2Q96PD7 388 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 TRNT1Q96Q11 434 aaKnown RBP20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 ZNF347Q96SE7 839 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 PELOQ9BRX2 385 aaKnown RBP20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 YIPF2Q9BWQ6 316 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 RUBCNLQ9H714 662 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 ZNF304Q9HCX3 659 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 ADAP2Q9NPF8 381 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 SRPK3Q9UPE1 567 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 MMACHCQ9Y4U1 282 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 KCNE3Q9Y6H6 103 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 R4GN57 208 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 VCANP13611 3396 aa20.07■□□□□ 0.8
TSPAN3-202ENST00000346495 A0A1B0GX78 115 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 TGFBR3LH3BV60 316 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 COQ9O75208 318 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 HPRP00739 348 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms