RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MFSD12Q6NUT3 480 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 USP51Q70EK9 711 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 PATL1Q86TB9 770 aaKnown RBP12.71□□□□□ -0.37
CDC42-202ENST00000344548 OR56A1Q8NGH5 318 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 MIPOL1Q8TD10 442 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 MUS81Q96NY9 551 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 SMOC1Q9H4F8 434 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 RLIMQ9NVW2 624 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 ZSCAN32Q9NX65 697 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 USE1Q9NZ43 259 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 PDP1Q9P0J1 537 aaPredicted RBP12.71□□□□□ -0.37
CDC42-202ENST00000344548 NTMQ9P121 344 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 CPED1A4D0V7 1026 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 PCDHGA12O60330 932 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.38
CDC42-202ENST00000344548 ATP1B1P05026 303 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 KHKP50053 298 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 CHRNEQ04844 493 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 DUSP8Q13202 625 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 KCNAB2Q13303 367 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 ARMC8Q8IUR7 673 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 MMABQ96EY8 250 aaPredicted RBP12.71□□□□□ -0.38
CDC42-202ENST00000344548 SLC38A1Q9H2H9 487 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 C3orf14Q9HBI5 128 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 ADAP2Q9NPF8 381 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 MAT2BQ9NZL9 334 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 DHCR7Q9UBM7 475 aaKnown RBP12.71□□□□□ -0.38
CDC42-202ENST00000344548 SCOCQ9UIL1 159 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 BAG5Q9UL15 447 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 CHST2Q9Y4C5 530 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 LYVE1Q9Y5Y7 322 aa12.71□□□□□ -0.38
CDC42-202ENST00000344548 GPC6Q9Y625 555 aaPredicted RBP12.71□□□□□ -0.38
CDC42-202ENST00000344548 TMEM221A6NGB7 291 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 M0R296 226 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 ACP2P11117 423 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 NT5EP21589 574 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 MYF6P23409 242 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 DNAJA1P31689 397 aaKnown RBP12.7□□□□□ -0.38
CDC42-202ENST00000344548 XCR1P46094 333 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 KCNJ5P48544 419 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 PDX1P52945 283 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 NR1D2Q14995 579 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 DUSP5Q16690 384 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 GPAT3Q53EU6 434 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 CCNJQ5T5M9 372 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 TMEM151BQ8IW70 566 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 LGI4Q8N135 537 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 OR1L3Q8NH93 324 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 VANGL1Q8TAA9 524 aaPredicted RBP12.7□□□□□ -0.38
CDC42-202ENST00000344548 SLC9A6Q92581 669 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 CDS1Q92903 461 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 POP5Q969H6 163 aaKnown RBP12.7□□□□□ -0.38
CDC42-202ENST00000344548 PRR14Q9BWN1 585 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 NPLQ9BXD5 320 aaPredicted RBP12.7□□□□□ -0.38
CDC42-202ENST00000344548 GAREM1Q9H706 876 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 REEP1Q9H902 201 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 FBXO34Q9NWN3 711 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 FAM118AQ9NWS6 357 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 NLGN3Q9NZ94 848 aa12.7□□□□□ -0.38
CDC42-202ENST00000344548 CENPVL1A0A0U1RR11 272 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 A0A1W2PQM1 296 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 TMEM150CB9EJG8 249 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 MAOAP21397 527 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 FPR1P21462 350 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 OR1D4P47884 311 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 EFNA3P52797 238 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 CDH12P55289 794 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 ELOAQ14241 798 aaKnown RBP12.69□□□□□ -0.38
CDC42-202ENST00000344548 HIPK1Q86Z02 1210 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 AMER2Q8N7J2 671 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 OR4C15Q8NGM1 316 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 LZICQ8WZA0 190 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 SDCCAG3Q96C92 435 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 RBM4BQ9BQ04 359 aaKnown RBP12.69□□□□□ -0.38
CDC42-202ENST00000344548 RBM4Q9BWF3 364 aaKnown RBP12.69□□□□□ -0.38
CDC42-202ENST00000344548 ACTRT3Q9BYD9 372 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 C8orf4Q9NR00 106 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 THSD1Q9NS62 852 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 ACER3Q9NUN7 267 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 EXD2Q9NVH0 621 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 FER1L5A0AVI2 2057 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 FITM1A5D6W6 292 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 M0R3H8 397 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 PCDH17O14917 1159 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 DUX1O43812 170 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 NSA2O95478 260 aaKnown RBP12.69□□□□□ -0.38
CDC42-202ENST00000344548 HPRP00739 348 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 ALBP02768 609 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 CYP4B1P13584 511 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 GPR3P46089 330 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 CDH15P55291 814 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 HSD11B2P80365 405 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 FAM53BQ14153 422 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 RNF220Q5VTB9 566 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 FOXB2Q5VYV0 432 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 KDM4DQ6B0I6 523 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 TCTN3Q6NUS6 607 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 BHLHB9Q6PI77 547 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 TTLL10Q6ZVT0 673 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 ZNF605Q86T29 641 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms