RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 FAM50BQ9Y247 325 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SNX11Q9Y5W9 270 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 DSPPQ9NZW4 1301 aa7.71□□□□□ -1.17
ATG4A-201ENST00000343524 PLSCR5A0PG75 271 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 OR51F1A6NGY5 319 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 FAM74A7A6NL05 159 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 GTPBP1O00178 669 aaKnown RBP7.71□□□□□ -1.18
ATG4A-201ENST00000343524 RGS11O94810 467 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 KDM4BO94953 1096 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 GADD45GO95257 159 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 EPOP01588 193 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 TFP02787 698 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 RLN2P04090 185 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 HAPLN1P10915 354 aaPredicted RBP7.71□□□□□ -1.18
ATG4A-201ENST00000343524 PKMP14618 531 aaKnown RBP7.71□□□□□ -1.18
ATG4A-201ENST00000343524 SPI1P17947 270 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 PRPS1L1P21108 318 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 CD86P42081 329 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 STAT5AP42229 794 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 TTPAP49638 278 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 HMGA2P52926 109 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 RPS25P62851 125 aaKnown RBP7.71□□□□□ -1.18
ATG4A-201ENST00000343524 KRT33BQ14525 404 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF528Q3MIS6 628 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 SV2CQ496J9 727 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 FAM74A3Q4VXF1 159 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 SIRPB2Q5JXA9 342 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 FBXO47Q5MNV8 452 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 ATAT1Q5SQI0 421 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 AVPI1Q5T686 147 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 FAM69AQ5T7M9 428 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 FKBP1CQ5VVH2 108 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 C12orf73Q69YU5 71 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 HBMQ6B0K9 141 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 SLC25A25Q6KCM7 469 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 KIAA1211LQ6NV74 962 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 SUSD1Q6UWL2 747 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 ASB18Q6ZVZ8 466 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 PLPPR4Q7Z2D5 763 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 AQP11Q8NBQ7 271 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 PXT1Q8NFP0 134 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 OR5M9Q8NGP3 310 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 NEIL3Q8TAT5 605 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 UBTD2Q8WUN7 234 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 ORAI1Q96D31 301 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.71□□□□□ -1.18
ATG4A-201ENST00000343524 ABHD16BQ9H3Z7 469 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 ZCCHC4Q9H5U6 513 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 CLEC2DQ9UHP7 191 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 ACAD8Q9UKU7 415 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 CLCA2Q9UQC9 943 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 NME7Q9Y5B8 376 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.18
ATG4A-201ENST00000343524 COL4A4P53420 1690 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 LOC105369274A0A096LPK9 316 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 A0A1B0GUH1 482 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 TRAPPC13A5PLN9 417 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NAP1L6A6NFF2 107 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NPIPB8E9PQR5 432 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 MANBAO00462 879 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 EFCAB14O75071 495 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 DXOO77932 396 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 HPP00738 406 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SERPINA3P01011 423 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ALDOBP05062 364 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 THP07101 528 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ADRA2AP08913 450 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 UBBP0CG47 229 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 UBCP0CG48 685 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ELNP15502 786 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 CDKN2CP42773 168 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 LIMS1P48059 325 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 MTNR1BP49286 362 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 PGDP52209 483 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RAB5BP61020 215 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RPS27AP62979 156 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 UBA52P62987 128 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ITKQ08881 620 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RAB40BQ12829 278 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ILKQ13418 452 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 DYRK1AQ13627 763 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 UBXN2BQ14CS0 331 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ST3GAL2Q16842 350 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 TMEM44Q2T9K0 475 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RNF212Q495C1 297 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 FBXO48Q5FWF7 155 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NBPF12Q5TAG4 269 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 MARC1Q5VT66 337 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 AFMIDQ63HM1 303 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RAET1GQ6H3X3 334 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF425Q6IV72 752 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NCEH1Q6PIU2 408 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 METTL7BQ6UX53 244 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 GSG1LQ6UXU4 331 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 TRMT11Q7Z4G4 463 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SLC30A8Q8IWU4 369 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RGL4Q8IZJ4 473 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 OR4N4Q8N0Y3 316 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ARMC10Q8N2F6 343 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 STK40Q8N2I9 435 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms