RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CACNG6Q9BXT2 260 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 NDUFB11Q9NX14 153 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 PIM2Q9P1W9 311 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 GALPQ9UBC7 116 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 TSPAN16Q9UKR8 245 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 LSM2Q9Y333 95 aaKnown RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 PCDHA10Q9Y5I2 948 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 SCN9AQ15858 1988 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 ANKRD31Q8N7Z5 1873 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 C9orf170A2RU37 121 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 ACKR2O00590 384 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 MED7O43513 233 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 OR10H2O60403 315 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 PRR35P0CG20 571 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 MTHFD2P13995 350 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 NME1P15531 152 aaKnown RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 ITGB7P26010 798 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 SFNP31947 248 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 S100A11P31949 105 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 CDKN2CP42773 168 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 RGS4P49798 205 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 UBE2MP61081 183 aaKnown RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 TGFB2P61812 414 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 TCP10Q12799 353 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 COTL1Q14019 142 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 TKFCQ3LXA3 575 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 RNF212Q495C1 297 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 ATP13A5Q4VNC0 1218 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 SPIN4Q56A73 249 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 TMEM255AQ5JRV8 349 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 SFRP4Q6FHJ7 346 aaPredicted RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 H3F3CQ6NXT2 135 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF549Q6P9A3 640 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 PTCHD4Q6ZW05 846 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 TRIM69Q86WT6 500 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 LSRQ86X29 649 aaPredicted RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 STK40Q8N2I9 435 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 OR52B6Q8NGF0 335 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 OR4Q3Q8NH05 313 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 RNASE11Q8TAA1 199 aaKnown RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 POC1BQ8TC44 478 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 C11orf24Q96F05 449 aaPredicted RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 KCTD7Q96MP8 289 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 SOSTQ9BQB4 213 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 C11orf84Q9BUA3 381 aaPredicted RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 CDCA4Q9BXL8 241 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 LMAN2LQ9H0V9 348 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 MAGIXQ9H6Y5 334 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 IMP3Q9NV31 184 aaKnown RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 DLGAP4Q9Y2H0 992 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 SNX11Q9Y5W9 270 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 USP3Q9Y6I4 520 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 AP1M2Q9Y6Q5 423 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 COL11A2P13942 1736 aaPredicted RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 OR6C76A6NM76 312 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 OPN1SWP03999 348 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF35P13682 527 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 NPR2P20594 1047 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 ITGA3P26006 1051 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 PDHA2P29803 388 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 RORAP35398 523 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 GPR143P51810 404 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 CCL23P55773 120 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 KCNJ10P78508 379 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 BLOC1S1P78537 153 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 ZXDBP98169 803 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 GRM1Q13255 1194 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 C3orf38Q5JPI3 329 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 MEDAGQ5VYS4 303 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 KCTD11Q693B1 232 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 C16orf54Q6UWD8 224 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 CLEC9AQ6UXN8 241 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 IKBIPQ70UQ0 350 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 SPAG16Q8N0X2 631 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 CLDN22Q8N7P3 220 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 C11orf65Q8NCR3 313 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 OR5M9Q8NGP3 310 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 F2RL3Q96RI0 385 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 GABARAPL3Q9BY60 117 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 TLNRD1Q9H1K6 362 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 ATP13A1Q9HD20 1204 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 ZIM2Q9NZV7 527 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 PIPOXQ9P0Z9 390 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 PIKFYVEQ9Y2I7 2098 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 FAM170BA6NMN3 283 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF879B4DU55 563 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 FAM72CH0Y354 149 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 SOX14O95416 240 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 SOX18P35713 384 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 SLC1A3P43003 542 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 OR1E2P47887 323 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 RPS8P62241 208 aaKnown RBP9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 FABP5Q01469 135 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 DGKZQ13574 1117 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 TSNQ15631 228 aaKnown RBP9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 CRB2Q5IJ48 1285 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 FAM72AQ5TYM5 149 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 OR52W1Q6IF63 320 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 ETFRF1Q6IPR1 90 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 FAM72DQ6L9T8 149 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms