RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TMEM35AQ53FP2 167 aa21.75■■□□□ 1.07
CLPTM1-201ENST00000337392 COLEC12Q5KU26 742 aa21.75■■□□□ 1.07
CLPTM1-201ENST00000337392 FCRL6Q6DN72 434 aa21.75■■□□□ 1.07
CLPTM1-201ENST00000337392 SLC15A4Q8N697 577 aa21.75■■□□□ 1.07
CLPTM1-201ENST00000337392 ZNF354BQ96LW1 612 aa21.75■■□□□ 1.07
CLPTM1-201ENST00000337392 TPSD1Q9BZJ3 242 aa21.75■■□□□ 1.07
CLPTM1-201ENST00000337392 H3BN98 237 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 SERPINB1P30740 379 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 AHRP35869 848 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 TUBA3CQ13748 450 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 RUNX2Q13950 521 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 DNAJC22Q8N4W6 341 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 A4GNTQ9UNA3 340 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 CENPVL1A0A0U1RR11 272 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 GABRB1P18505 474 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 TNNI3P19429 210 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 KIAA1024LP59773 190 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 TARDBPQ13148 414 aaKnown RBP eCLIP21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 TRIM48Q8IWZ4 208 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 SLC16A11Q8NCK7 471 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 OR7G2Q8NG99 324 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 PSMA8Q8TAA3 256 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 SNRNP27Q8WVK2 155 aaKnown RBP21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 KCND3Q9UK17 655 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 MKLN1Q9UL63 735 aa21.74■■□□□ 1.07
CLPTM1-201ENST00000337392 SEMA4FO95754 770 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 IGHV4-34P06331 123 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 ACVR2AP27037 513 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 GRK5P34947 590 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 HMGA2P52926 109 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 ABATP80404 500 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 CCNJQ5T5M9 372 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 ASPGQ86U10 573 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 TMEM52Q8NDY8 209 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 NUP43Q8NFH3 380 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 FAM3CQ92520 227 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 OR2A5Q96R48 311 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 OR7D2Q96RA2 312 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 PITHD1Q9GZP4 211 aaPredicted RBP21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 GPN2Q9H9Y4 310 aaPredicted RBP21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 PSORS1C1Q9UIG5 152 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 GPC6Q9Y625 555 aaPredicted RBP21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 HSPE1-MOB4S4R3N1 261 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 PTHP01270 115 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 HNRNPCP07910 306 aaKnown RBP eCLIP21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 HSMCR30P0CW71 290 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 DRD1P21728 446 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 TMED1Q13445 227 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 DHRS4L2Q6PKH6 230 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 TBC1D19Q8N5T2 526 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 B3GNT7Q8NFL0 401 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 ABTB1Q969K4 478 aaPredicted RBP21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 ZNF681Q96N22 645 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 SIGLEC11Q96RL6 698 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 RBCK1Q9BYM8 510 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 CAPN10Q9HC96 672 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 DNAJC27Q9NZQ0 273 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 TMEM9Q9P0T7 183 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 FTSJ1Q9UET6 329 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 SNX7Q9UNH6 387 aa21.73■■□□□ 1.07
CLPTM1-201ENST00000337392 CXCR4P61073 352 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 MLLT1Q03111 559 aaPredicted RBP21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 ST3GAL4Q11206 333 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 CCINQ13939 588 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 USP30Q70CQ3 517 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 PRSS48Q7RTY5 328 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 SLC9A6Q92581 669 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 ELP4Q96EB1 424 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 TOE1Q96GM8 510 aaKnown RBP21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 ZNF607Q96SK3 696 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 GPR174Q9BXC1 333 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 ANKMY1Q9P2S6 941 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 REV1Q9UBZ9 1251 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 ASXL3Q9C0F0 2248 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 M0R082 166 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 H1F0P07305 194 aaKnown RBP21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 CD36P16671 472 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 CSNK2A2P19784 350 aaPredicted RBP21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 DCST1Q5T197 706 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 PODNL1Q6PEZ8 512 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 ANKRD13BQ86YJ7 626 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 CLIP4Q8N3C7 705 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 ACTR10Q9NZ32 417 aa21.72■■□□□ 1.07
CLPTM1-201ENST00000337392 OR2A25A4D2G3 310 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 OR2W5A6NFC9 320 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 TGFBR2P37173 567 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 OPRL1P41146 370 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 AVPR1BP47901 424 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 CRISP1P54107 249 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 CCDC85BQ15834 202 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 P2RY8Q86VZ1 359 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 YIPF6Q96EC8 236 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 ZBTB20Q9HC78 741 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 MAN2C1Q9NTJ4 1040 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 EHD3Q9NZN3 535 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 CHST2Q9Y4C5 530 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 PCDHGB1Q9Y5G3 927 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 PMF1-BGLAPU3KQ54 211 aa21.71■■□□□ 1.07
CLPTM1-201ENST00000337392 SEC16AO15027 2179 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms