RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 EVA1AQ9H8M9 152 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 ZNF701Q9NV72 531 aaPredicted RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 KCNIP1Q9NZI2 227 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 CCNOP22674 350 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 GALNT1Q10472 559 aaPredicted RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 PGM2L1Q6PCE3 622 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 OR4K1Q8NGD4 311 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 OR8K3Q8NH51 312 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 RAB8BQ92930 207 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 MMABQ96EY8 250 aaPredicted RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 TP63Q9H3D4 680 aaPredicted RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 FAIMQ9NVQ4 179 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 WRAP73Q9P2S5 460 aaPredicted RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 SUSD2Q9UGT4 822 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 ICKQ9UPZ9 632 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 WNT6Q9Y6F9 365 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 F2P00734 622 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 FBLP22087 321 aaKnown RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 SOX2P48431 317 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 ERVK-25P63136 954 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 MELKQ14680 651 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 CDNFQ49AH0 187 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 LIPKQ5VXJ0 399 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 TMPRSS12Q86WS5 348 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 LGALS12Q96DT0 336 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 SCLYQ96I15 445 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 FOXK1P85037 733 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 MLLT1Q03111 559 aaPredicted RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 RAB11BQ15907 218 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 CMPK2Q5EBM0 449 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 GLYATL2Q8WU03 294 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 PTCHD1Q96NR3 888 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 TUBB1Q9H4B7 451 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 RHCGQ9UBD6 479 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 PCTPQ9UKL6 214 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 C3P01024 1663 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 H7BY64 318 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 PORP16435 677 aaPredicted RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 POLR2CP19387 275 aaPredicted RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 CCDC71LQ8N9Z2 235 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 PRAP1Q96NZ9 151 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 OR4K3Q96R72 315 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 SAMD10Q9BYL1 202 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 SARDHQ9UL12 918 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 A0A0A6YYH2 397 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 TRBV2A0A0J9YWF9 115 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 A6NJ64 397 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 PENKP01210 267 aaPredicted RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 JMJD7P0C870 316 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 CASP6P55212 293 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 NKX3-2P78367 333 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 SGCAQ16586 387 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 ODF4Q2M2E3 257 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 SLC18B1Q6NT16 456 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 ZNF808Q8N4W9 903 aaPredicted RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 GDPD1Q8N9F7 314 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 DEDD2Q8WXF8 326 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 NAP1L6A6NFF2 107 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 PTTG1O95997 202 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 HSD17B1P14061 328 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 ELOAQ14241 798 aaKnown RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 RNASE10Q5GAN6 216 aaKnown RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 C1orf94Q6P1W5 598 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 BLOC1S3Q6QNY0 202 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 PXKQ7Z7A4 578 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 CCDC116Q8IYX3 515 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 ARL5BQ96KC2 179 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 NELL2Q99435 816 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 GJE1A6NN92 205 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 DUX1O43812 170 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 TOXO94900 526 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 MT-CO2P00403 227 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 RHOP08100 348 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 ACRP10323 421 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 AK4P27144 223 aaPredicted RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 PPP1R8Q12972 351 aaKnown RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 LY6G5CQ5SRR4 150 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 CATSPEREQ5SY80 951 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 LCN8Q6JVE9 175 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 TSPYL5Q86VY4 417 aaPredicted RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 CA5BQ9Y2D0 317 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 ATE1O95260 518 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 PITPNBP48739 271 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 EIF2B1Q14232 305 aaKnown RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 METTL2BQ6P1Q9 378 aaKnown RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 SHFQ7M4L6 423 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 MAMDC2Q7Z304 686 aaPredicted RBP12.49□□□□□ -0.41
HLCS-201ENST00000336648 CPNE8Q86YQ8 564 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 OR13C3Q8NGS6 347 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 SLC7A13Q8TCU3 470 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 ABCG5Q9H222 651 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
HLCS-201ENST00000336648 HBQ1P09105 142 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 PABPC4LP0CB38 370 aaKnown RBP12.48□□□□□ -0.41
HLCS-201ENST00000336648 ELK4P28324 431 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 CD34P28906 385 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 ZNF136P52737 540 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 NTRK2Q16620 822 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 NXPE4Q6UWF7 544 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 SUSD1Q6UWL2 747 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms