RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 NR0B1P51843 470 aaKnown RBP12.95□□□□□ -0.34
LIMS1-201ENST00000332345 NCBP2P52298 156 aaKnown RBP eCLIP12.95□□□□□ -0.34
LIMS1-201ENST00000332345 DCAF7P61962 342 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 EMX2Q04743 252 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 LTB4RQ15722 352 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 PDCD2Q16342 344 aaPredicted RBP12.95□□□□□ -0.34
LIMS1-201ENST00000332345 ZNF628Q5EBL2 1059 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 IL23RQ5VWK5 629 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 ZNF324BQ6AW86 544 aaPredicted RBP12.95□□□□□ -0.34
LIMS1-201ENST00000332345 SULF2Q8IWU5 870 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 PSD4Q8NDX1 1056 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 OR52R1Q8NGF1 315 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 OR9A2Q8NGT5 310 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 C16orf52Q8NHV5 167 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 KAT2AQ92830 837 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 GFM2Q969S9 779 aaKnown RBP12.95□□□□□ -0.34
LIMS1-201ENST00000332345 ADIPOR1Q96A54 375 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 PPCDCQ96CD2 204 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 MTERF3Q96E29 417 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 ZNF764Q96H86 408 aaPredicted RBP12.95□□□□□ -0.34
LIMS1-201ENST00000332345 SH3GL2Q99962 352 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 SH3BP4Q9P0V3 963 aa12.95□□□□□ -0.34
LIMS1-201ENST00000332345 MYO18BQ8IUG5 2567 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 HMGB1P1B2RPK0 211 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 PLOD3O60568 738 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 ZNF354AO60765 605 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 SNNO75324 88 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 LRATO95237 230 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 NADKO95544 446 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 CBX7O95931 251 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 P04436 131 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 JUNP05412 331 aaKnown RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 CNR1P21554 472 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 PTGER1P34995 402 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 MRPS35P82673 323 aaKnown RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 ALDH6A1Q02252 535 aaKnown RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 EXOSC7Q15024 291 aaKnown RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 ZNF791Q3KP31 576 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 KRTCAP3Q53RY4 240 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 SLC22A10Q63ZE4 541 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 LIX1Q8N485 282 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 ZNF441Q8N8Z8 693 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 CLHC1Q8NHS4 586 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 SPACA9Q96E40 222 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 HSPBAP1Q96EW2 488 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 AMDHD1Q96NU7 426 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 PRPF18Q99633 342 aaKnown RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 SLX1AQ9BQ83 275 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 GLIPR2Q9H4G4 154 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 AKTIPQ9H8T0 292 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 PNPOQ9NVS9 261 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 TAS2R9Q9NYW1 312 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 NOP53Q9NZM5 478 aaKnown RBP12.94□□□□□ -0.34
LIMS1-201ENST00000332345 GIMAP2Q9UG22 337 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 MAPRE3Q9UPY8 281 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 NPFFR2Q9Y5X5 522 aa12.94□□□□□ -0.34
LIMS1-201ENST00000332345 RELNP78509 3460 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 A0A087WV62 115 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 SLCO1B7G3V0H7 640 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 PLOD2O00469 737 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 TP53I11O14683 189 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 KLF11O14901 512 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 ACOX3O15254 700 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 PDPK1O15530 556 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 FBXO45P0C2W1 286 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 DRD5P21918 477 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 GPX3P22352 226 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 SOX18P35713 384 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 HPCAL1P37235 193 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 PPICP45877 212 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 TMED10P49755 219 aaKnown RBP12.93□□□□□ -0.34
LIMS1-201ENST00000332345 MEOX1P50221 254 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 EMDP50402 254 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 MANFP55145 182 aaKnown RBP12.93□□□□□ -0.34
LIMS1-201ENST00000332345 PMP22Q01453 160 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 MRPL49Q13405 166 aaKnown RBP12.93□□□□□ -0.34
LIMS1-201ENST00000332345 PRSS53Q2L4Q9 553 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 EIF2S3LQ2VIR3 472 aaKnown RBP12.93□□□□□ -0.34
LIMS1-201ENST00000332345 TTMPQ5BVD1 217 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 LRRC34Q8IZ02 419 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 CPSF7Q8N684 471 aaKnown RBP12.93□□□□□ -0.34
LIMS1-201ENST00000332345 NATD1Q8N6N6 113 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 ZFP28Q8NHY6 868 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 PRR7Q8TB68 274 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 ZNF75CPQ92670 426 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-201ENST00000332345 ZBED6CLQ96FA7 236 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-201ENST00000332345 LCORQ96JN0 433 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-201ENST00000332345 PPP1R36Q96LQ0 422 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 FRMD6Q96NE9 622 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 C1orf50Q9BV19 199 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 NUF2Q9BZD4 464 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 ACBD3Q9H3P7 528 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 SACM1LQ9NTJ5 587 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 ATAD3AQ9NVI7 634 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 CNIH4Q9P003 139 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 NINQ8N4C6 2090 aa12.93□□□□□ -0.34
LIMS1-201ENST00000332345 TRPC5OSA6NMA1 111 aa12.92□□□□□ -0.34
LIMS1-201ENST00000332345 COQ9O75208 318 aa12.92□□□□□ -0.34
LIMS1-201ENST00000332345 IFI6P09912 130 aa12.92□□□□□ -0.34
LIMS1-201ENST00000332345 NAGAP17050 411 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms