RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 GLIPR2Q9H4G4 154 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 TIGARQ9NQ88 270 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 TESQ9UGI8 421 aaKnown RBP14.5□□□□□ -0.09
BRCC3-201ENST00000330045 SLC9A8Q9Y2E8 581 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 SLC27A6Q9Y2P4 619 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 A0A0G2JN53 185 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 ANTXRLA6NF34 631 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 IL1AP01583 271 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 EPHX1P07099 455 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 CPEP16870 476 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 S100A1P23297 94 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 CDK5Q00535 292 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 UBE3AQ05086 875 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 TMEM52BQ4KMG9 183 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 ATAT1Q5SQI0 421 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 ERN2Q76MJ5 926 aaKnown RBP14.5□□□□□ -0.09
BRCC3-201ENST00000330045 OLIG3Q7RTU3 272 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 IQCHQ86VS3 1027 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 RAB43Q86YS6 212 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 NT5DC2Q9H857 520 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 MAN2C1Q9NTJ4 1040 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 ZCCHC3Q9NUD5 404 aaKnown RBP14.5□□□□□ -0.09
BRCC3-201ENST00000330045 TAS2R7Q9NYW3 318 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 ADAM29Q9UKF5 820 aa14.5□□□□□ -0.09
BRCC3-201ENST00000330045 MRPS23Q9Y3D9 190 aaKnown RBP14.5□□□□□ -0.09
BRCC3-201ENST00000330045 EDDM13A0A1B0GTR0 161 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 AP3D1O14617 1153 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 LSM11P83369 360 aaKnown RBP eCLIP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 ELAVL3Q14576 367 aaKnown RBP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 ATAD3CQ5T2N8 411 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 FAM46CQ5VWP2 391 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 C22orf42Q6IC83 251 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 OR4C11Q6IEV9 310 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 KIAA1211LQ6NV74 962 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 C1orf94Q6P1W5 598 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 OR6T1Q8NGN1 323 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 CXorf40AQ8TE69 158 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 TMEM203Q969S6 136 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 COX14Q96I36 57 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 GPA33Q99795 319 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 MENTQ9BUN1 341 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 DDX31Q9H8H2 851 aaKnown RBP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 ABCB9Q9NP78 766 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 N6AMT1Q9Y5N5 214 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 A0A1W2PPV9 198 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 LCMT2O60294 686 aaKnown RBP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 LGI1O95970 557 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 SERPIND1P05546 499 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 MYL12AP19105 171 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 TCEA1P23193 301 aaKnown RBP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 SMSP52788 366 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 EFNB1P98172 346 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 BNC1Q01954 994 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 SNAPC1Q16533 368 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 KLHL22Q53GT1 634 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 FAM131AQ6UXB0 335 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 HMGN2P46Q86SG4 172 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 LRRTM4Q86VH4 590 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 MMAAQ8IVH4 418 aaKnown RBP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 CLDN22Q8N7P3 220 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 MORN4Q8NDC4 146 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 CREB3L4Q8TEY5 395 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 SMG7Q92540 1137 aaKnown RBP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 OTUB1Q96FW1 271 aaPredicted RBP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 AMDHD1Q96NU7 426 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 DPH7Q9BTV6 452 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 SPATA5L1Q9BVQ7 753 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 PITHD1Q9GZP4 211 aaPredicted RBP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 RERGLQ9H628 205 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 TM7SF3Q9NS93 570 aa14.49□□□□□ -0.09
BRCC3-201ENST00000330045 SPIN1Q9Y657 262 aaPredicted RBP14.49□□□□□ -0.09
BRCC3-201ENST00000330045 LINC00854A0A1B0GVQ3 168 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 A0A1W2PQ09 198 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 OTOL1A6NHN0 477 aaPredicted RBP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 HOXC11O43248 304 aaPredicted RBP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 EPPINO95925 133 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 ADH1CP00326 375 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 CHRM5P08912 532 aaPredicted RBP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 TSPAN19P0C672 248 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 MSL3P1P0C860 447 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 ACADMP11310 421 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 PRKAG1P54619 331 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 TRA2BP62995 288 aaKnown RBP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 SCN1BQ07699 218 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 HNRNPA0Q13151 305 aaKnown RBP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 GLYR1Q49A26 553 aaPredicted RBP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 FLYWCH1Q4VC44 716 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 NDUFAF5Q5TEU4 345 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 METRNLQ641Q3 311 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 LAPTM4BQ86VI4 370 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 BBS10Q8TAM1 723 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 FGF11Q92914 225 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 MSLNLQ96KJ4 702 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 PBX4Q9BYU1 374 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 OR2B2Q9GZK3 357 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 CTPS2Q9NRF8 586 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 ZSCAN32Q9NX65 697 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 FBXW2Q9UKT8 454 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 CARD8Q9Y2G2 431 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 A0A0A6YYD5 115 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms