RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 KNL1Q8NG31 2342 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 LINC01553A4QN01 128 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 AP3D1O14617 1153 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SLITRK5O94991 958 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 HMGN2P05204 90 aaKnown RBP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 GIPRP48546 466 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SNRPGP62308 76 aaKnown RBP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 CSNK1G2P78368 415 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 RHAGQ02094 409 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SLAMF1Q13291 335 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 FBXO46Q6PJ61 603 aaPredicted RBP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 GATAD2BQ8WXI9 593 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 AMDHD1Q96NU7 426 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SDHCQ99643 169 aaPredicted RBP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 IL20RAQ9UHF4 553 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 WBP11Q9Y2W2 641 aaKnown RBP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 KCNE3Q9Y6H6 103 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 DSPPQ9NZW4 1301 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 FHP07954 510 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 MYL12AP19105 171 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 TIE1P35590 1138 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 ETV5P41161 510 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 ETV1P50549 477 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 HNRNPA0Q13151 305 aaKnown RBP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SF3B4Q15427 424 aaKnown RBP eCLIP13.26□□□□□ -0.298e-9■■■■□ 21.6
ATP2C1-201ENST00000328560 METRNLQ641Q3 311 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 FAM131AQ6UXB0 335 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 ZNF793Q6ZN11 406 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 TBC1D19Q8N5T2 526 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 COL26A1Q96A83 441 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 TXNDC15Q96J42 360 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 INSM2Q96T92 566 aaPredicted RBP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 TAPBPLQ9BX59 468 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 PELI2Q9HAT8 420 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 CNIH4Q9P003 139 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SEC14L4Q9UDX3 406 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SYNDIG1LA6NDD5 238 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 CPSF4LA6NMK7 179 aaKnown RBP13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 MID1O15344 667 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 CHRM4P08173 479 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 CAV3P56539 151 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 TAS2R41P59536 307 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 REEP5Q00765 189 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 NCF4Q15080 339 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 PDGFRLQ15198 375 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 TMEM240Q5SV17 173 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 SCAIQ8N9R8 606 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 TMEM145Q8NBT3 493 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 DOK4Q8TEW6 326 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 ARMC5Q96C12 935 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 DMRTB1Q96MA1 342 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 RACGAP1Q9H0H5 632 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 ABCB9Q9NP78 766 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 FBXL12Q9NXK8 326 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 HCN2Q9UL51 889 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 STUB1Q9UNE7 303 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 PCDHGA4Q9Y5G9 962 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 A0A1W2PPV9 198 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 ARRDC5A6NEK1 342 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 SSTR4P31391 388 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 CRYBB2P43320 205 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 AVPR1BP47901 424 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 KRR1Q13601 381 aaKnown RBP13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 SYT14P1Q58G82 188 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 FAM78AQ5JUQ0 283 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 PHC2Q8IXK0 858 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 ETFBKMTQ8IXQ9 262 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 RASSF5Q8WWW0 418 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 SMARCD2Q92925 531 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 ZG16BQ96DA0 208 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 TM9SF2Q99805 663 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 PLA2G12AQ9BZM1 189 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 ATG4BQ9Y4P1 393 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 GPM6BQ13491 265 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 SLC9A5Q14940 896 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 BAK1Q16611 211 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 MEDAGQ5VYS4 303 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 NXNL2Q5VZ03 156 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 C18orf63Q68DL7 685 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 C12orf73Q69YU5 71 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 FAM92BQ6ZTR7 304 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 LHFPL3Q86UP9 236 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 NANOGP1Q8N7R0 232 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 SYT14Q8NB59 555 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 OR52I1Q8NGK6 324 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 FAIM2Q9BWQ8 316 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 IGFLR1Q9H665 355 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 MALT1Q9UDY8 824 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 ZNF232Q9UNY5 417 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 GPSM3Q9Y4H4 160 aa13.25□□□□□ -0.29
ATP2C1-201ENST00000328560 DYRK3O43781 588 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 PIPP12273 146 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 MAT2AP31153 395 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 CRTC2Q53ET0 693 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 KAT2AQ92830 837 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 PRSS16Q9NQE7 514 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 LSM2Q9Y333 95 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 DOCK9Q9BZ29 2069 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 TMCC2O75069 709 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms