RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ANXA8P13928 327 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 IL7RP16871 459 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 HLCSP50747 726 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 EPHA4P54764 986 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 GFERP55789 205 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 RAPSNQ13702 412 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 ZNF628Q5EBL2 1059 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 C6orf141Q5SZD1 244 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 ATAD3BQ5T9A4 648 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 MFSD12Q6NUT3 480 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 SETD9Q8NE22 299 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 ADAMTS15Q8TE58 950 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 TGM7Q96PF1 710 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 FEVQ99581 238 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 GIN1Q9NXP7 522 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 KCND3Q9UK17 655 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 CLCA2Q9UQC9 943 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 LIPT1Q9Y234 373 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 RNF215Q9Y6U7 377 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 TLCD2A6NGC4 264 aa14□□□□□ -0.17
TPM3-205ENST00000328159 DUXAA6NLW8 204 aa14□□□□□ -0.17
TPM3-205ENST00000328159 PCDH17O14917 1159 aa14□□□□□ -0.17
TPM3-205ENST00000328159 CHST10O43529 356 aa14□□□□□ -0.17
TPM3-205ENST00000328159 NME6O75414 186 aaPredicted RBP14□□□□□ -0.17
TPM3-205ENST00000328159 ATP1B1P05026 303 aa14□□□□□ -0.17
TPM3-205ENST00000328159 MLLT3P42568 568 aaPredicted RBP14□□□□□ -0.17
TPM3-205ENST00000328159 GABRA4P48169 554 aa14□□□□□ -0.17
TPM3-205ENST00000328159 NDUFA9Q16795 377 aa14□□□□□ -0.17
TPM3-205ENST00000328159 CDC73Q6P1J9 531 aa14□□□□□ -0.17
TPM3-205ENST00000328159 TSSK4Q6SA08 328 aa14□□□□□ -0.17
TPM3-205ENST00000328159 MAMSTRQ6ZN01 415 aa14□□□□□ -0.17
TPM3-205ENST00000328159 RBM44Q6ZP01 1051 aaKnown RBP14□□□□□ -0.17
TPM3-205ENST00000328159 OR4D11Q8NGI4 311 aa14□□□□□ -0.17
TPM3-205ENST00000328159 VANGL1Q8TAA9 524 aaPredicted RBP14□□□□□ -0.17
TPM3-205ENST00000328159 ADAMTS16Q8TE57 1224 aa14□□□□□ -0.17
TPM3-205ENST00000328159 FBLIM1Q8WUP2 373 aa14□□□□□ -0.17
TPM3-205ENST00000328159 SLC35A4Q96G79 324 aa14□□□□□ -0.17
TPM3-205ENST00000328159 TRNT1Q96Q11 434 aaKnown RBP14□□□□□ -0.17
TPM3-205ENST00000328159 PSD2Q9BQI7 771 aa14□□□□□ -0.17
TPM3-205ENST00000328159 GABARAPL3Q9BY60 117 aa14□□□□□ -0.17
TPM3-205ENST00000328159 RAB33BQ9H082 229 aa14□□□□□ -0.17
TPM3-205ENST00000328159 CALML5Q9NZT1 146 aa14□□□□□ -0.17
TPM3-205ENST00000328159 RHCGQ9UBD6 479 aa14□□□□□ -0.17
TPM3-205ENST00000328159 PLCL2Q9UPR0 1127 aa14□□□□□ -0.17
TPM3-205ENST00000328159 GMPPBQ9Y5P6 360 aa14□□□□□ -0.17
TPM3-205ENST00000328159 HSPE1-MOB4S4R3N1 261 aa14□□□□□ -0.17
TPM3-205ENST00000328159 PCDH15Q96QU1 1955 aa14□□□□□ -0.17
TPM3-205ENST00000328159 CACNA1IQ9P0X4 2223 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 A0A0A6YYC8 382 aaPredicted RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 A8MVJ9 347 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 I3L1I5 382 aaPredicted RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 FFAR1O14842 300 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 CCNB2O95067 398 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 MED26O95402 600 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 SOX18P35713 384 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 FNTBP49356 437 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 IL5RAQ01344 420 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 NPRL3Q12980 569 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 TOP3AQ13472 1001 aaPredicted RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 FAM214AQ32MH5 1076 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 CNPY1Q3B7I2 92 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 FHL5Q5TD97 284 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 HEPHL1Q6MZM0 1159 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 TCTN3Q6NUS6 607 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 DEF8Q6ZN54 512 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 C16orf62Q7Z3J2 963 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 WDR53Q7Z5U6 358 aaPredicted RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 RBM45Q8IUH3 476 aaKnown RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 PHF10Q8WUB8 498 aaKnown RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 NCSTNQ92542 709 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 ZDHHC12Q96GR4 267 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 ZNF285Q96NJ3 590 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 ALPK1Q96QP1 1244 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 APOL4Q9BPW4 351 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 SLC38A1Q9H2H9 487 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 ADNPQ9H2P0 1102 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 ERVMER34-1Q9H9K5 563 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 PAPOLBQ9NRJ5 636 aaKnown RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 RLIMQ9NVW2 624 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 SOHLH2Q9NX45 425 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 LRIT1Q9P2V4 623 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 EPHA6Q9UF33 1036 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 NDRG4Q9ULP0 352 aaKnown RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 C19orf53Q9UNZ5 99 aaPredicted RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 CSNK1G3Q9Y6M4 447 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 IGHV5-51A0A0C4DH38 117 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 E9PQ18 207 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 B4GAT1O43505 415 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 SLITRK5O94991 958 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 AGR2O95994 175 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 NT5EP21589 574 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 FUT4P22083 530 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 CRHBPP24387 322 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 EPHA2P29317 976 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 ALDH4A1P30038 563 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 HOXA6P31267 233 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 SKP1P63208 163 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 BNIP3Q12983 259 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 TRMT12Q53H54 448 aaKnown RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 COLEC12Q5KU26 742 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms