RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ERV3-1Q14264 604 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 COX20Q5RI15 118 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 SAXO2Q658L1 398 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 OR52E8Q6IFG1 317 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 COX15Q7KZN9 410 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 SLC30A8Q8IWU4 369 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 CACTIN-AS1Q8N1I8 211 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 ZFP28Q8NHY6 868 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 ADAMTS14Q8WXS8 1223 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 VPS50Q96JG6 964 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 TAAR9Q96RI9 348 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 YIPF2Q9BWQ6 316 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 ULBP3Q9BZM4 244 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 TRPC4Q9UBN4 977 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 ACSL6Q9UKU0 697 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 MAP4K5Q9Y4K4 846 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 A0A1W2PS29 197 aa17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 DCDC2BA2VCK2 349 aa17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 JRKO75564 520 aa17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 CST1P01037 141 aa17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 PDK3Q15120 406 aa17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 ZNF630Q2M218 657 aaPredicted RBP17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 NKAIN1Q4KMZ8 207 aa17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 RNF130Q86XS8 419 aa17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 OR5AK3PQ8NH89 298 aa17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 ASPSCR1Q9BZE9 553 aa17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 SIRT3Q9NTG7 399 aaPredicted RBP17.58■□□□□ 0.4
EXOSC3-201ENST00000327304 C9orf172C9J069 976 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 PDLIM1O00151 329 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 B4GALT2O60909 372 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 ERAL1O75616 437 aaKnown RBP17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 CDC123O75794 336 aaPredicted RBP17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 NTSP30990 170 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 PRIM2P49643 509 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 GTF2A1P52655 376 aaPredicted RBP17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 ZNF750Q32MQ0 723 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 CCDC80Q76M96 950 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 OR4N5Q8IXE1 308 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 ADAMTS18Q8TE60 1221 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 TBC1D20Q96BZ9 403 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 AMDHD1Q96NU7 426 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 DDA1Q9BW61 102 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 PRDM9Q9NQV7 894 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 SNX8Q9Y5X2 465 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 AK5Q9Y6K8 562 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 PTPRBP23467 1997 aa17.57■□□□□ 0.4
EXOSC3-201ENST00000327304 TEX51A0A1B0GUA7 166 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 OR2W5A6NFC9 320 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 MYO1GB0I1T2 1018 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 MEN1O00255 615 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 ZNF682O95780 498 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 SEMG1P04279 462 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 LYNP07948 512 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 FHP07954 510 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 C8orf89P0DMQ9 161 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 ARAFP10398 606 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 ZNF23P17027 643 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 CLCN2P51788 898 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 DCDP81605 110 aaKnown RBP17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 ID2Q02363 134 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 EEF1A2Q05639 463 aaKnown RBP17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 DUSP2Q05923 314 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 MYBPC3Q14896 1274 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 NHSL2Q5HYW2 709 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 C6orf52Q5T4I8 152 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 LCN10Q6JVE6 187 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 ZC3H7AQ8IWR0 971 aaKnown RBP17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 SVOPLQ8N434 492 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 CNRIP1Q96F85 164 aaPredicted RBP17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 AKIRIN1Q9H9L7 192 aaPredicted RBP17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 IL1RAPQ9NPH3 570 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 LANCL2Q9NS86 450 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 ADPRHL2Q9NX46 363 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 CTSFQ9UBX1 484 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 FGF17O60258 216 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 LDB3O75112 727 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 MAGEA8P43361 318 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 HSPB3Q12988 150 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 SCARB2Q14108 478 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 CEBPEQ15744 281 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 TMEM64Q6YI46 380 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 ZDHHC21Q8IVQ6 265 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 MAL2Q969L2 176 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 TMBIM1Q969X1 311 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 BBS4Q96RK4 519 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 ZPBPQ9BS86 351 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 GLIPR2Q9H4G4 154 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 FOXJ2Q9P0K8 574 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 PCDHGA3Q9Y5H0 932 aa17.56■□□□□ 0.4
EXOSC3-201ENST00000327304 NUP214P35658 2090 aaPredicted RBP17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 MYOCOSA0A1B0GUC4 107 aa17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 EI24O14681 340 aa17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 STK17BO94768 372 aa17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 FEN1P39748 380 aaKnown RBP17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 CDK9P50750 372 aaKnown RBP17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 DSTNP60981 165 aa17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 TXNL4AP83876 142 aaKnown RBP17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 CDK6Q00534 326 aa17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 VWA2Q5GFL6 755 aa17.55■□□□□ 0.4
EXOSC3-201ENST00000327304 UGT2A3Q6UWM9 527 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms