RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 NKG7Q16617 165 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 CNIH2Q6PI25 160 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 ZC3H14Q6PJT7 736 aaKnown RBP14.5□□□□□ -0.09
VARS2-201ENST00000321897 SMPDL3AQ92484 453 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 RGMAQ96B86 450 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 NRTNQ99748 197 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 C1QTNF7Q9BXJ2 289 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 NUDT15Q9NV35 164 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 NUP50Q9UKX7 468 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 GFRA2O00451 464 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 KMOO15229 486 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 PRKCAP17252 672 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 HOXB6P17509 224 aaKnown RBP14.5□□□□□ -0.09
VARS2-201ENST00000321897 SIM1P81133 766 aaPredicted RBP14.5□□□□□ -0.09
VARS2-201ENST00000321897 TOR1AIP1Q5JTV8 583 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 IKBIPQ70UQ0 350 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 C11orf54Q9H0W9 315 aaPredicted RBP14.5□□□□□ -0.09
VARS2-201ENST00000321897 MBD1Q9UIS9 605 aaPredicted RBP14.5□□□□□ -0.09
VARS2-201ENST00000321897 TBC1D24Q9ULP9 559 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 TET1Q8NFU7 2136 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 FAM170BA6NMN3 283 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 ARHGAP33O14559 1287 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 LYRM1O43325 122 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 TP53P04637 393 aaPredicted RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 WDR5P61964 334 aaKnown RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 PPP2R2BQ00005 443 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 ZNF155Q12901 538 aaPredicted RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 CBLBQ13191 982 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 SYT6Q5T7P8 510 aaPredicted RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 GTF2IRD2BQ6EKJ0 949 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 GTF2IRD2Q86UP8 949 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 OR6K6Q8NGW6 343 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 OR51A7Q8NH64 312 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 C16orf78Q8WTQ4 265 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 MAP6Q96JE9 813 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 NELL2Q99435 816 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 SLC6A16Q9GZN6 736 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 ZNF385DQ9H6B1 395 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 C11orf49Q9H6J7 331 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 ANKRD28O15084 1053 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 CDK1P06493 297 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 RETP07949 1114 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 IRS1P35568 1242 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 ERN2Q76MJ5 926 aaKnown RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 TRAM1L1Q8N609 369 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 BOLLQ8N9W6 283 aaKnown RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 GATSQ8NAP1 163 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.49□□□□□ -0.09
VARS2-201ENST00000321897 POP5Q969H6 163 aaKnown RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 IFT27Q9BW83 186 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 GALNT9Q9HCQ5 603 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 SLAMF7Q9NQ25 335 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 SARDHQ9UL12 918 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 PCM1Q15154 2024 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 HEPACAM2A8MVW5 462 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 SLC35G6P0C7Q6 338 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 MCCD1P59942 119 aaPredicted RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 PRR5P85299 388 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 ADAM15Q13444 863 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 ATXN7L3Q14CW9 347 aaPredicted RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 AFMIDQ63HM1 303 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 TMEFF1Q8IYR6 380 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 OR2T35Q8NGX2 323 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 CNDP2Q96KP4 475 aaKnown RBP14.49□□□□□ -0.09
VARS2-201ENST00000321897 LRR1Q96L50 414 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 NTMT1Q9BV86 223 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 ALOXE3Q9BYJ1 711 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 MAN2B2Q9Y2E5 1009 aa14.49□□□□□ -0.09
VARS2-201ENST00000321897 LRRC37AA6NMS7 1700 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 CKAP5Q14008 2032 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 ASPDHA6ND91 283 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 DDCP20711 480 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 STAT5AP42229 794 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 TM4SF4P48230 202 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 SLC14A1Q13336 389 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 GPR19Q15760 415 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 SLC16A12Q6ZSM3 486 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 DCUN1D3Q8IWE4 304 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 COX18Q8N8Q8 333 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 OR51L1Q8NGJ5 315 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 RIPOR3Q96MK2 946 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 GAL3ST4Q96RP7 486 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 GORASP2Q9H8Y8 452 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 CNIH4Q9P003 139 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 HCFC2Q9Y5Z7 792 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 ENTPD6O75354 484 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 ASGR2P07307 311 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 CSNK2A2P19784 350 aaPredicted RBP14.48□□□□□ -0.09
VARS2-201ENST00000321897 SDHBP21912 280 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 CRISP1P54107 249 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 CLDN2P57739 230 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 ZNF791Q3KP31 576 aaPredicted RBP14.48□□□□□ -0.09
VARS2-201ENST00000321897 ZNF783Q6ZMS7 281 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 GLCCI1Q86VQ1 547 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 PTRH1Q86Y79 214 aaKnown RBP14.48□□□□□ -0.09
VARS2-201ENST00000321897 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
VARS2-201ENST00000321897 IQCF2Q8IXL9 164 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 OR51G2Q8NGK0 314 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 MAU2Q9Y6X3 613 aa14.48□□□□□ -0.09
VARS2-201ENST00000321897 TCRBV5S2A0A599 114 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms