RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 FAM110CQ1W6H9 321 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 FAM69AQ5T7M9 428 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 SYPL2Q5VXT5 272 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 CFAP77Q6ZQR2 320 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 KCTD20Q7Z5Y7 419 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 MMAAQ8IVH4 418 aaKnown RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 FKBP10Q96AY3 582 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF487B1APH4 448 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 HYAL2Q12891 473 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 TRMT10AQ8TBZ6 339 aaKnown RBP16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF395Q9H8N7 513 aaPredicted RBP16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 CACNG2Q9Y698 323 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 SHOXO15266 292 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 NDUFV2P19404 249 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 NIPAL4Q0D2K0 466 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF169Q14929 603 aaPredicted RBP16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 SUMF2Q8NBJ7 301 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 OR5T1Q8NG75 326 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 OR4K1Q8NGD4 311 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 HAVCR2Q8TDQ0 301 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 BACE2Q9Y5Z0 518 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 ANKRD36CQ5JPF3 1778 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 DUSP11O75319 330 aaKnown RBP16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 ATE1O95260 518 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 ADH1BP00325 375 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 EPOP01588 193 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 PTPN6P29350 595 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 CCINQ13939 588 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 CYP27C1Q4G0S4 372 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 HMGB4Q8WW32 186 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 AGTR2P50052 363 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 ASRGL1Q7L266 308 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 OR4E2Q8NGC2 313 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 CYB5D2Q8WUJ1 264 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 KCNJ16Q9NPI9 418 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 DMAC2Q9NW81 257 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 CD300AQ9UGN4 299 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 FKTNO75072 461 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 STSP08842 583 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 UGT2B7P16662 529 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 OR5P2Q8WZ92 322 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 GPR88Q9GZN0 384 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 OR51E2Q9H255 320 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 NAALAD2Q9Y3Q0 740 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 DNMT3AQ9Y6K1 912 aaPredicted RBP16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 SLC22A5O76082 557 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 ZC3H14Q6PJT7 736 aaKnown RBP16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 SFXN5Q8TD22 340 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 PGAM5Q96HS1 289 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 TMEM248Q9NWD8 314 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 UBFD1O14562 309 aaKnown RBP16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 MTX2O75431 263 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 CSTAP01040 98 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF440Q8IYI8 595 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 SLC7A13Q8TCU3 470 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 RAB8BQ92930 207 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 XPNPEP1Q9NQW7 623 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 RLIMQ9NVW2 624 aa16.13■□□□□ 0.17
SMCHD1-201ENST00000320876 PEX12O00623 359 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 KDELR3O43731 214 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 DEFA6Q01524 100 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 ECH1Q13011 328 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 SAMD10Q9BYL1 202 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 RAB9BQ9NP90 201 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 SEC14L2O76054 403 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 STATHP02808 62 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 ETFAP13804 333 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 APOFQ13790 326 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 SH3YL1Q96HL8 342 aaPredicted RBP16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 SLC16A5O15375 505 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 CHRNB1P11230 501 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 TIA1P31483 386 aaKnown RBP eCLIP16.12■□□□□ 0.179e-8■■■□□ 16.7
SMCHD1-201ENST00000320876 AQP2P41181 271 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 SPIN2AQ99865 258 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 SPIN2BQ9BPZ2 258 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 DCNP07585 359 aaKnown RBP16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 RETP07949 1114 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 HRH2P25021 359 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 KCNIP4Q6PIL6 250 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 GAS2L1Q99501 681 aaPredicted RBP16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 WDR6Q9NNW5 1121 aaKnown RBP16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 NFS1Q9Y697 457 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 ICE1Q9Y2F5 2266 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 JRKO75564 520 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 RABGGTBP53611 331 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 PEA15Q15121 130 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 PGM2L1Q6PCE3 622 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 LRRC25Q8N386 305 aaPredicted RBP16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 FAM46AQ96IP4 442 aaKnown RBP16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 HEBP1Q9NRV9 189 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 C2orf42Q9NWW7 574 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 GDPGP1Q6ZNW5 385 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 DNAJC22Q8N4W6 341 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 NUP43Q8NFH3 380 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 OR5AK2Q8NH90 309 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 HAS2Q92819 552 aa16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 GLYATL1Q969I3 302 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms