RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZNF648Q5T619 568 aaPredicted RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 FAM217AQ8IXS0 508 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CPXM2Q8N436 756 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 IL22RA1Q8N6P7 574 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 BOLLQ8N9W6 283 aaKnown RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 FANK1Q8TC84 345 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 RIT1Q92963 219 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 ARL11Q969Q4 196 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 NECAB3Q96P71 396 aaPredicted RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 NPLQ9BXD5 320 aaPredicted RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 SLC29A3Q9BZD2 475 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 HCFC1R1Q9NWW0 138 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 LAMB2P55268 1798 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 DOCK2Q92608 1830 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 A0A0G2JMP0 313 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 FAM221BA6H8Z2 402 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 PRAMEF26H0Y7S4 382 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 ARPC5O15511 151 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 TSPAN15O95858 294 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 C6orf47O95873 294 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CD47Q08722 323 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 HYAL1Q12794 435 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 SPHARQ15513 63 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CHRFAM7AQ494W8 412 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 MPP7Q5T2T1 576 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 C10orf62Q5T681 223 aaPredicted RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 RNF130Q86XS8 419 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 OR4M2Q8NGB6 313 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 ELMOD3Q96FG2 381 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CDC6Q99741 560 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CWH43Q9H720 699 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 SLC22A14Q9Y267 594 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 ZNF705GA8MUZ8 300 aaPredicted RBP7.81□□□□□ -1.16
VPS41-202ENST00000310301 LYRM1O43325 122 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 PRKYO43930 277 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 DNAJB1P25685 340 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 ENPP2Q13822 863 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CEACAM7Q14002 265 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 ZNF805Q5CZA5 627 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 SIRPB2Q5JXA9 342 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CFAP77Q6ZQR2 320 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 AMZ2Q86W34 360 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 ZSWIM9Q86XI8 627 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 GID4Q8IVV7 300 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 PLD6Q8N2A8 252 aaKnown RBP7.81□□□□□ -1.16
VPS41-202ENST00000310301 NATD1Q8N6N6 113 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 OR2T35Q8NGX2 323 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 OR8K5Q8NH50 307 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 MAPK15Q8TD08 544 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 RGMAQ96B86 450 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 SRMSQ9H3Y6 488 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 SEC61A2Q9H9S3 476 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 MAN2C1Q9NTJ4 1040 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 ANKMY1Q9P2S6 941 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 COPS7AQ9UBW8 275 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 AKAP11Q9UKA4 1901 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 SHANK3Q9BYB0 1731 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 C2orf78A6NCI8 922 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 OR6C65A6NJZ3 312 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 ZNF726A6NNF4 738 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 UBFD1O14562 309 aaKnown RBP7.81□□□□□ -1.16
VPS41-202ENST00000310301 STC2O76061 302 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CNTN5O94779 1100 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 AGR2O95994 175 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CDK4P11802 303 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 HLA-EP13747 358 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 DCKP27707 260 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 HTR1EP28566 365 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CD34P28906 385 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 BTN1A1Q13410 526 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 TBC1D25Q3MII6 688 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 ALG10BQ5I7T1 473 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 GPR157Q5UAW9 335 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 GLT8D1Q68CQ7 371 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 TANGO2Q6ICL3 276 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 DNM1P34Q6PK57 102 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 GSG1LQ6UXU4 331 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 HTR3DQ70Z44 454 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 POC1BQ8TC44 478 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 SLC35F5Q8WV83 523 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 SULT4A1Q9BR01 284 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 TCEAL7Q9BRU2 100 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 ZDHHC5Q9C0B5 715 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 RNF11Q9Y3C5 154 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 TIAM2Q8IVF5 1701 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 DOCK1Q14185 1865 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 A0A0A6YYH2 397 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 A6NJ64 397 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 MAFKO60675 156 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 TFP02787 698 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 RETP07949 1114 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 AKR1C4P17516 323 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 SLC6A6P31641 620 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 GJA4P35212 333 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 MAGEA3P43357 314 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CCR8P51685 355 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CASP6P55212 293 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 DNAJB13P59910 316 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 DEFA6Q01524 100 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 SEMG2Q02383 582 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms