RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 OR9A4Q8NGU2 314 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 MS4A4EQ96PG1 132 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 ADNPQ9H2P0 1102 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 RHCGQ9UBD6 479 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 CLCA2Q9UQC9 943 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 COMMD3-BMI1R4GMX3 469 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 RHPN2P1A8MT19 583 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 FFAR1O14842 300 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 PCDH17O14917 1159 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 NME6O75414 186 aaPredicted RBP19.94■□□□□ 0.78
ATG4D-201ENST00000309469 RDH16O75452 317 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 IL7RP16871 459 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 NPRL3Q12980 569 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 ZNF628Q5EBL2 1059 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 ATAD3BQ5T9A4 648 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 TCTN3Q6NUS6 607 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 MFSD12Q6NUT3 480 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 ADAMTS15Q8TE58 950 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 PHF10Q8WUB8 498 aaKnown RBP19.94■□□□□ 0.78
ATG4D-201ENST00000309469 FBLIM1Q8WUP2 373 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 SLC35A4Q96G79 324 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 TGM7Q96PF1 710 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 IER2Q9BTL4 223 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 RLIMQ9NVW2 624 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 GIN1Q9NXP7 522 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 NDRG4Q9ULP0 352 aaKnown RBP19.94■□□□□ 0.78
ATG4D-201ENST00000309469 GMPPBQ9Y5P6 360 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 DUXAA6NLW8 204 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 A8MVJ9 347 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 B4GAT1O43505 415 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 AHCYL1O43865 530 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 ATP1B1P05026 303 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 FUT4P22083 530 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 CRHBPP24387 322 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 SOX18P35713 384 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 GFERP55789 205 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 LAIR2Q6ISS4 152 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 CDC73Q6P1J9 531 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 OR4D11Q8NGI4 311 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 VANGL1Q8TAA9 524 aaPredicted RBP19.93■□□□□ 0.78
ATG4D-201ENST00000309469 TRNT1Q96Q11 434 aaKnown RBP19.93■□□□□ 0.78
ATG4D-201ENST00000309469 GABARAPL3Q9BY60 117 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 MUTYHQ9UIF7 546 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 RNF215Q9Y6U7 377 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 HSPE1-MOB4S4R3N1 261 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 DNAH14Q0VDD8 3507 aa19.93■□□□□ 0.78
ATG4D-201ENST00000309469 A0A1B0GVT2 93 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 CHST10O43529 356 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 SEMA7AO75326 666 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 EPHA2P29317 976 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 EPHA4P54764 986 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 IL5RAQ01344 420 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 COLEC12Q5KU26 742 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 MAMSTRQ6ZN01 415 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 WDR53Q7Z5U6 358 aaPredicted RBP19.92■□□□□ 0.78
ATG4D-201ENST00000309469 RBM45Q8IUH3 476 aaKnown RBP19.92■□□□□ 0.78
ATG4D-201ENST00000309469 SIMC1Q8NDZ2 872 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 NMD3Q96D46 503 aaKnown RBP19.92■□□□□ 0.78
ATG4D-201ENST00000309469 ALPK1Q96QP1 1244 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 PSD2Q9BQI7 771 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 WFDC6Q9BQY6 131 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 RAB33BQ9H082 229 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 PAPOLBQ9NRJ5 636 aaKnown RBP19.92■□□□□ 0.78
ATG4D-201ENST00000309469 CALML5Q9NZT1 146 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 LRIT1Q9P2V4 623 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 C19orf53Q9UNZ5 99 aaPredicted RBP19.92■□□□□ 0.78
ATG4D-201ENST00000309469 HCN4Q9Y3Q4 1203 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 TLCD2A6NGC4 264 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 E9PQ18 207 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 CCNB2O95067 398 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 EEF1B2P24534 225 aaKnown RBP19.92■□□□□ 0.78
ATG4D-201ENST00000309469 ALDH4A1P30038 563 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 GABRA4P48169 554 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 CDK5R2Q13319 367 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 TOP3AQ13472 1001 aaPredicted RBP19.92■□□□□ 0.78
ATG4D-201ENST00000309469 NDUFA9Q16795 377 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 FAM214AQ32MH5 1076 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 TRMT12Q53H54 448 aaKnown RBP19.92■□□□□ 0.78
ATG4D-201ENST00000309469 FHL5Q5TD97 284 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 NKAIN2Q5VXU1 208 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 HEPHL1Q6MZM0 1159 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 TSSK4Q6SA08 328 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 C16orf62Q7Z3J2 963 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 COMTD1Q86VU5 262 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 LACC1Q8IV20 430 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 SLC16A11Q8NCK7 471 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 TMIGD2Q96BF3 282 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 ZNF285Q96NJ3 590 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 APOL4Q9BPW4 351 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 SLC38A1Q9H2H9 487 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 ERVMER34-1Q9H9K5 563 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 NMNAT1Q9HAN9 279 aaPredicted RBP19.92■□□□□ 0.78
ATG4D-201ENST00000309469 EPHA6Q9UF33 1036 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 PLCL2Q9UPR0 1127 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 CEPT1Q9Y6K0 416 aa19.92■□□□□ 0.78
ATG4D-201ENST00000309469 GON4LQ3T8J9 2241 aa19.91■□□□□ 0.78
ATG4D-201ENST00000309469 A0A0A6YYC8 382 aaPredicted RBP19.91■□□□□ 0.78
ATG4D-201ENST00000309469 IGHV5-51A0A0C4DH38 117 aa19.91■□□□□ 0.78
ATG4D-201ENST00000309469 ENO4A6NNW6 628 aa19.91■□□□□ 0.78
ATG4D-201ENST00000309469 H3BSA7 217 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms