RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PCMT1P22061 227 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PRPH2P23942 346 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 OR1E1P30953 314 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 FMO4P31512 558 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 GKP32189 559 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SHMT2P34897 504 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 POLR2IP36954 125 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ETV5P41161 510 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TRPC1P48995 793 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 RGS4P49798 205 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 HK3P52790 923 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PLA2G16P53816 162 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 UCNP55089 124 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PFN3P60673 137 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 MAXP61244 160 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ISL1P61371 349 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TUBA1BP68363 451 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 GNA12Q03113 381 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 CACNG1Q06432 222 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF33BQ06732 778 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 CD47Q08722 323 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 FADDQ13158 208 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF177Q13360 481 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 C1orf61Q13536 156 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PCOLCEQ15113 449 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 MAPKAPK3Q16644 382 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 DGUOKQ16854 277 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 AP5B1Q2VPB7 878 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TRIM16LQ309B1 348 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 LRIF1Q5T3J3 769 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SYT6Q5T7P8 510 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 CACHD1Q5VU97 1274 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF691Q5VV52 312 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 FAM46CQ5VWP2 391 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ZCCHC8Q6NZY4 707 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SLC2A7Q6PXP3 512 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 DPY19L3Q6ZPD9 716 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SLC16A12Q6ZSM3 486 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TUBA1AQ71U36 451 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ERN2Q76MJ5 926 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PARS2Q7L3T8 475 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TMPRSS9Q7Z410 1059 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 GLT6D1Q7Z4J2 308 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 R3HCC1LQ7Z5L2 792 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 LDB1Q86U70 411 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 IGFN1Q86VF2 1251 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SFTPA2Q8IWL1 248 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ZC3H7AQ8IWR0 971 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SLC15A4Q8N697 577 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ARL10Q8N8L6 244 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TMIEQ8NEW7 156 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 OR7D4Q8NG98 312 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 OR4K2Q8NGD2 314 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 OR2T11Q8NH01 316 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PHF10Q8WUB8 498 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 EEF1AKMT1Q8WVE0 214 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 IPCEF1Q8WWN9 437 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SLC13A3Q8WWT9 602 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 FCGR1BQ92637 280 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 EXT2Q93063 718 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 LINGO1Q96FE5 620 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SLC47A1Q96FL8 570 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 REXO5Q96IC2 774 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 MAGEB10Q96LZ2 347 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 NSMCE3Q96MG7 304 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 RPRD1AQ96P16 312 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 MBOAT4Q96T53 435 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ZFYVE21Q9BQ24 234 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 NEURL2Q9BR09 285 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 LRRC61Q9BV99 259 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 FUNDC2Q9BWH2 189 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 BOCQ9BWV1 1114 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SPATA9Q9BWV2 254 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SLC17A9Q9BYT1 436 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 NAA50Q9GZZ1 169 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 P2RY12Q9H244 342 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TOR3AQ9H497 397 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ACTL8Q9H568 366 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 DUSP21Q9H596 190 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 RMND5AQ9H871 391 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ACTR8Q9H981 624 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 RDH14Q9HBH5 336 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PARVBQ9HBI1 364 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 AKIP1Q9NQ31 210 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 THSD1Q9NS62 852 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 STARD5Q9NSY2 213 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 INTS7Q9NVH2 962 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PAK1IP1Q9NWT1 392 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 UBA2Q9UBT2 640 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 GIMAP2Q9UG22 337 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 IL17BQ9UHF5 180 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 BAG5Q9UL15 447 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 MAPRE3Q9UPY8 281 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ITM2BQ9Y287 266 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TMED5Q9Y3A6 229 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 CCL27Q9Y4X3 112 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 OARD1Q9Y530 152 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PCDHGA8Q9Y5G5 932 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 HEMK1Q9Y5R4 338 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PTGDR2Q9Y5Y4 395 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms