RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ZNF366Q8N895 744 aa7.95□□□□□ -1.14
PCDHB1-201ENST00000306549 CITED4Q96RK1 184 aa7.95□□□□□ -1.14
PCDHB1-201ENST00000306549 ZPBPQ9BS86 351 aa7.95□□□□□ -1.14
PCDHB1-201ENST00000306549 TMLHEQ9NVH6 421 aa7.95□□□□□ -1.14
PCDHB1-201ENST00000306549 IL20RAQ9UHF4 553 aa7.95□□□□□ -1.14
PCDHB1-201ENST00000306549 CDH10Q9Y6N8 788 aa7.95□□□□□ -1.14
PCDHB1-201ENST00000306549 PCNX1Q96RV3 2341 aa7.95□□□□□ -1.14
PCDHB1-201ENST00000306549 VSTM2BA6NLU5 285 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 TYRP1P17643 537 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 TPTEP56180 551 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC26A5P58743 744 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 TRAM1Q15629 374 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CLEC12AQ5QGZ9 265 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 RAB12Q6IQ22 244 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 PLEKHO2Q8TD55 490 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 TREM1Q9NP99 234 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 FAM86C1Q9NVL1 165 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 TBCCD1Q9NVR7 557 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CACNA1HO95180 2353 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 C13orf42A0A1B0GVH6 325 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 BEST1O76090 585 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 PSKH1P11801 424 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 UQCRC2P22695 453 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 DCAF7P61962 342 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 POU6F2P78424 691 aaPredicted RBP7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 DNASE1L3Q13609 305 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CLCA4Q14CN2 919 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 PTCHD3Q3KNS1 767 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CYP27C1Q4G0S4 372 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC22A4Q9H015 551 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 RDH14Q9HBH5 336 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CACNA1DQ01668 2161 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 E7ENX8 843 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 PRAMEF2O60811 474 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 GABBR2O75899 941 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 ATE1O95260 518 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 MT-ND2P03891 347 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 KLK1P06870 262 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 GCH1P30793 250 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 KCNC4Q03721 635 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 NKAPLQ5M9Q1 402 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 HMBOX1Q6NT76 420 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 OR10G2Q8NGC3 310 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 OR5P2Q8WZ92 322 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 ALPK1Q96QP1 1244 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 GATA5Q9BWX5 397 aaPredicted RBP7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 RYDENQ9NUL5 291 aaKnown RBP7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 COMMD3Q9UBI1 195 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 DNAJB9Q9UBS3 223 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 ST14Q9Y5Y6 855 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 TMEM14AQ9Y6G1 99 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 MMP2P08253 660 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CD9P21926 228 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CD70P32970 193 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 HOXD12P35452 270 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 HTR3AP46098 478 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 AGTR2P50052 363 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 REEP3Q6NUK4 255 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 OR56A3Q8NH54 315 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 ASB15Q8WXK1 588 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 RELTQ969Z4 430 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 PGAM5Q96HS1 289 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 TGM7Q96PF1 710 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 TREX2Q9BQ50 279 aaPredicted RBP7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 DPAGT1Q9H3H5 408 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 REEP4Q9H6H4 257 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 KCNK13Q9HB14 408 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 SLCO3A1Q9UIG8 710 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 SH2B3Q9UQQ2 575 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 H6PDO95479 791 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC16A8O95907 504 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 POLR2CP19387 275 aaPredicted RBP7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 AHRP35869 848 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 USF2Q15853 346 aaPredicted RBP7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 FLYWCH1Q4VC44 716 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 HS6ST2Q96MM7 605 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 YIPF4Q9BSR8 244 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 POLDIP3Q9BY77 421 aaKnown RBP7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 TMEM100Q9NV29 134 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 SDHAF2Q9NX18 166 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 IL37Q9NZH6 218 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 HCRTR2O43614 444 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 F11P03951 625 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC2A2P11168 524 aaPredicted RBP7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 FOXN2P32314 431 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CTC1Q2NKJ3 1217 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 GARNL3Q5VVW2 1013 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CLEC6AQ6EIG7 209 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 ALYREFQ86V81 257 aaKnown RBP7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 NSMAFQ92636 917 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 PEBP4Q96S96 227 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 HEBP1Q9NRV9 189 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 E7ESA3 106 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 AHSGP02765 367 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 GKN3PP0CG01 181 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 CHRNA4P43681 627 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC6A8P48029 635 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 PLCXD2Q0VAA5 305 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 STEAP4Q687X5 459 aa7.94□□□□□ -1.14
PCDHB1-201ENST00000306549 LCTLQ6UWM7 567 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms