RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 INHBCP55103 352 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 PAGE3Q5JUK9 113 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 TSPYL5Q86VY4 417 aaPredicted RBP15.16■□□□□ 0.02
USP42-201ENST00000306177 NOP16Q9Y3C1 178 aaKnown RBP15.16■□□□□ 0.02
USP42-201ENST00000306177 ENPP4Q9Y6X5 453 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 SLC1A7O00341 560 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 PRKCAP17252 672 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 GPR4P46093 362 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 GTDC1Q4AE62 458 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 CEACAM19Q7Z692 300 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 SERINC2Q96SA4 455 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 C12orf4Q9NQ89 552 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 RARRES3Q9UL19 164 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 MYH9P35579 1960 aaKnown RBP15.16■□□□□ 0.02
USP42-201ENST00000306177 ANKRD36CQ5JPF3 1778 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 TEX13CA0A0J9YWL9 993 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 TSPAN9O75954 239 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 GSTT2P0CG29 244 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 ARSAP15289 507 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 DRD1P21728 446 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 USP53Q70EK8 1073 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 ZNF565Q8N9K5 539 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 ANKLE1Q8NAG6 615 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 SLC22A8Q8TCC7 542 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 DOK4Q8TEW6 326 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 FAM3CQ92520 227 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 RFT1Q96AA3 541 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 LGALS12Q96DT0 336 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 SLC46A2Q9BY10 475 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 KLHL42Q9P2K6 505 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 FARSAQ9Y285 508 aaKnown RBP15.16■□□□□ 0.02
USP42-201ENST00000306177 DNMT3AQ9Y6K1 912 aaPredicted RBP15.16■□□□□ 0.02
USP42-201ENST00000306177 FXYD6-FXYD2A0A087WZ82 144 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 LAMTOR5O43504 91 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 PHC1P78364 1004 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 SPIN3Q5JUX0 258 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 TPSD1Q9BZJ3 242 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 RNF38Q9H0F5 515 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 FXYD6Q9H0Q3 95 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 NANSQ9NR45 359 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 UCKL1Q9NWZ5 548 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 KLHL21Q9UJP4 597 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 SH3D21A4FU49 640 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 PYCR1P32322 319 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 DPP6P42658 865 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 PLP2Q04941 152 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 NAGSQ8N159 534 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 ACBD7Q8N6N7 88 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 TOR1AIP2Q8NFQ8 470 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 OR4K5Q8NGD3 323 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 OR13J1Q8NGT2 312 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 ZFAND2BQ8WV99 257 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 FCAMRQ8WWV6 532 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 APOOQ9BUR5 198 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 SMURF1Q9HCE7 757 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 DMRT3Q9NQL9 472 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 NUDT15Q9NV35 164 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 ENTPD2Q9Y5L3 495 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 MYH14Q7Z406 1995 aaKnown RBP15.15■□□□□ 0.02
USP42-201ENST00000306177 TAF1P21675 1872 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 SLX4Q8IY92 1834 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 GRIN2CQ14957 1233 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 CENPSQ8N2Z9 138 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 NAXEQ8NCW5 288 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 ARRDC2Q8TBH0 407 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 SRA1Q9HD15 236 aaKnown RBP15.15■□□□□ 0.02
USP42-201ENST00000306177 RNASET2O00584 256 aaKnown RBP15.15■□□□□ 0.02
USP42-201ENST00000306177 PVALBP20472 110 aaPredicted RBP15.15■□□□□ 0.02
USP42-201ENST00000306177 ZXDBP98169 803 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 EIF5AL1Q6IS14 154 aaKnown RBP15.15■□□□□ 0.02
USP42-201ENST00000306177 GATAD2BQ8WXI9 593 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 DTD2Q96FN9 168 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 NTMT1Q9BV86 223 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 HOXD1Q9GZZ0 328 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 RXFP3Q9NSD7 469 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 DKK3Q9UBP4 350 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 DHDHQ9UQ10 334 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 PADI2Q9Y2J8 665 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 MAST2Q6P0Q8 1798 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 LOC100509620A0A075B734 347 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 TEX13DA0A0J9YY54 714 aaPredicted RBP15.15■□□□□ 0.02
USP42-201ENST00000306177 CDC40O60508 579 aaKnown RBP eCLIP15.15■□□□□ 0.02
USP42-201ENST00000306177 PABPC4LP0CB38 370 aaKnown RBP15.15■□□□□ 0.02
USP42-201ENST00000306177 PER3P56645 1201 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 GXYLT1Q4G148 440 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 BMFQ96LC9 184 aa15.15■□□□□ 0.02
USP42-201ENST00000306177 CNN2Q99439 309 aaKnown RBP15.15■□□□□ 0.02
USP42-201ENST00000306177 PRAMEF2O60811 474 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 GSTM2P28161 218 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 ALG10BQ5I7T1 473 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 DTWD1Q8N5C7 304 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 SLC5A8Q8N695 610 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 ZSCAN4Q8NAM6 433 aaPredicted RBP15.14■□□□□ 0.01
USP42-201ENST00000306177 MS4A4EQ96PG1 132 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.14■□□□□ 0.01
USP42-201ENST00000306177 CXCL16Q9H2A7 254 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 TMEM165Q9HC07 324 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 TRAPPC13A5PLN9 417 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 JRKO75564 520 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 FAM189BP81408 668 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms