RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ZNF275Q9NSD4 429 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 CBLCQ9ULV8 474 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ADAMTS20P59510 1910 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 TRPM6Q9BX84 2022 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 TRDV1A0A1B0GX56 115 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 OPN1SWP03999 348 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 CTSLP07711 333 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 YES1P07947 543 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ANKRD34CP0C6C1 535 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ELNP15502 786 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 CEBPBP17676 345 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 MMP11P24347 488 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ERP29P30040 261 aaKnown RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 HSD17B2P37059 387 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SLC6A11P48066 632 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 KCNJ5P48544 419 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 EPHA4P54764 986 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 BTG1P62324 171 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 OLR1P78380 273 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ZIC1Q15915 447 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 CPSF6Q16630 551 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS50-202ENST00000305866 RSBN1Q5VWQ0 802 aaPredicted RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 TMEM64Q6YI46 380 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 HSD11B1LQ7Z5J1 315 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 RAB43Q86YS6 212 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 RASGEF1AQ8N9B8 481 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 FAM46DQ8NEK8 389 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 OR7G3Q8NG95 312 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SLC38A5Q8WUX1 472 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ELMO1Q92556 727 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 WDR89Q96FK6 387 aaPredicted RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 TMEM169Q96HH4 297 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 AHCYL2Q96HN2 611 aaKnown RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 PGLYRP3Q96LB9 341 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 APOLD1Q96LR9 279 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 PKP4Q99569 1192 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 DUSP26Q9BV47 211 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SLC46A2Q9BY10 475 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SHARPINQ9H0F6 387 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ABCG4Q9H172 646 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 LINC00597Q9H2U6 94 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 GALNT9Q9HCQ5 603 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 TIGARQ9NQ88 270 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 NPDC1Q9NQX5 325 aaPredicted RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 ENAMQ9NRM1 1142 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SPG21Q9NZD8 308 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 LSM7Q9UK45 103 aaKnown RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 TRAV19A0A0A6YYK7 116 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 A0A1W2PRQ8 180 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 WASHC1A8K0Z3 465 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 MEN1O00255 615 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 GSTA4O15217 222 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 PRICKLE3O43900 615 aaPredicted RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 HCN1O60741 890 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ZGLP1P0C6A0 271 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SULT1A3P0DMM9 295 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SULT1A4P0DMN0 295 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SDC2P34741 201 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 OMPP47874 163 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 PCYT1AP49585 367 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 RORCP51449 518 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 RPS11P62280 158 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS50-202ENST00000305866 SHC2P98077 582 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 DUSP2Q05923 314 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ZNF763Q0D2J5 394 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 NHLRC3Q5JS37 347 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 WDR45BQ5MNZ6 344 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 FAM205BPQ63HN1 556 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 KIAA1161Q6NSJ0 714 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 TFAP2EQ6VUC0 442 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ERN2Q76MJ5 926 aaKnown RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 DEPDC4Q8N2C3 294 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 LINC00471Q8N535 108 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 CELF5Q8N6W0 485 aaKnown RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 HORMAD2Q8N7B1 307 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ATP6V1C2Q8NEY4 427 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 NFKBIDQ8NI38 313 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 CXorf40AQ8TE69 158 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SELENOMQ8WWX9 145 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 DEDD2Q8WXF8 326 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 DTD2Q96FN9 168 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ZNF514Q96K75 400 aaPredicted RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 PANX1Q96RD7 426 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 NRTNQ99748 197 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SPON2Q9BUD6 331 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 CNPPD1Q9BV87 410 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 BEX2Q9BXY8 128 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 SMG9Q9H0W8 520 aaKnown RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 OR52A5Q9H2C5 316 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ANKRD19PQ9H560 264 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 BARX1Q9HBU1 254 aaPredicted RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 CYSLTR2Q9NS75 346 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ACSS1Q9NUB1 689 aaPredicted RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 OBP2AQ9NY56 170 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 B4GALT6Q9UBX8 382 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 CRLS1Q9UJA2 301 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ING1Q9UK53 422 aaPredicted RBP5.13□□□□□ -1.59
VPS50-202ENST00000305866 FBXW2Q9UKT8 454 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 ACSL6Q9UKU0 697 aa5.13□□□□□ -1.59
VPS50-202ENST00000305866 HCN2Q9UL51 889 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms