RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 LHFPL3Q86UP9 236 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 MEX3DQ86XN8 651 aaKnown RBP10.29□□□□□ -0.76
ZNF558-201ENST00000301475 MMP21Q8N119 569 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 HGDQ93099 445 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 LINC00052Q96N35 136 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 FUZQ9BT04 418 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 PLA2G12AQ9BZM1 189 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 SLC7A5P2Q9GIP4 190 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 BRF2Q9HAW0 419 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 FBXW2Q9UKT8 454 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 MTMR11A4FU01 709 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 SAP18O00422 153 aaKnown RBP10.29□□□□□ -0.76
ZNF558-201ENST00000301475 KHNYNO15037 678 aaKnown RBP10.29□□□□□ -0.76
ZNF558-201ENST00000301475 GPR37L1O60883 481 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 MTX2O75431 263 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 BCHEP06276 602 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 IRF1P10914 325 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 ACP2P11117 423 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 MMP11P24347 488 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 DCDC1P59894 354 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 DSTNP60981 165 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 EFNB1P98172 346 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF33BQ06732 778 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF763Q0D2J5 394 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 C2orf80Q0P641 193 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 BTN1A1Q13410 526 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 CAMK2DQ13557 499 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 CCSMST1Q4G0I0 132 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 SPIN4Q56A73 249 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 GARNL3Q5VVW2 1013 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 CXCL17Q6UXB2 119 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 CHMP1BQ7LBR1 199 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 HDDC2Q7Z4H3 204 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 KIAA0907Q7Z7F0 614 aaPredicted RBP10.29□□□□□ -0.76
ZNF558-201ENST00000301475 WFDC5Q8TCV5 224 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 FBXW5Q969U6 566 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 RFT1Q96AA3 541 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 MED8Q96G25 268 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 OR51J1Q9H342 316 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 C11orf49Q9H6J7 331 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 FGF20Q9NP95 211 aaPredicted RBP10.29□□□□□ -0.76
ZNF558-201ENST00000301475 GULP1Q9UBP9 304 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 ASB4Q9Y574 426 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 G3V3Q6 166 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 TOR1AO14656 332 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 DHFRP00374 187 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 HRGP04196 525 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ACSM4P0C7M7 580 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 HSD3B1P14060 373 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 CELP19835 753 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ATP5C1P36542 298 aaKnown RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 OR1G1P47890 313 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 GIPRP48546 466 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 DGKGP49619 791 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 GBX2P52951 348 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 AP1S2P56377 157 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 VSX2P58304 361 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 NAE1Q13564 534 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 NTRK2Q16620 822 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 SLC25A30Q5SVS4 291 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 IER5LQ5T953 404 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 REEP3Q6NUK4 255 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 TNFAIP8L2Q6P589 184 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 RSPO2Q6UXX9 243 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 COMTD1Q86VU5 262 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 MS4A15Q8N5U1 240 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 RAET1EQ8TD07 263 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 SLC9A6Q92581 669 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 THAP7Q9BT49 309 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 AP5M1Q9H0R1 490 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 CLEC4MQ9H2X3 399 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 IMP3Q9NV31 184 aaKnown RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 KLHL42Q9P2K6 505 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 KCNMB2Q9Y691 235 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 CACNG2Q9Y698 323 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ARHGEF33A8MVX0 844 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 EEF1E1O43324 174 aaKnown RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 SH3BP5O60239 455 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 NME6O75414 186 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 STC2O76061 302 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 EPHX1P07099 455 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 HSD3B2P26439 372 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 FLT3LGP49771 235 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 AP1S1P61966 158 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 RAB40BQ12829 278 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF155Q12901 538 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 PIN1Q13526 163 aaPredicted RBP10.28□□□□□ -0.76
ZNF558-201ENST00000301475 PDE7AQ13946 482 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 DUSP6Q16828 381 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 CD276Q5ZPR3 534 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 MZT2AQ6P582 158 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 COMMD6Q7Z4G1 85 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ZER1Q7Z7L7 766 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 BEST4Q8NFU0 473 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 SLC38A5Q8WUX1 472 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 PPCDCQ96CD2 204 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 CXorf40BQ96DE9 158 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ISYNA1Q9NPH2 558 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 ENAMQ9NRM1 1142 aa10.28□□□□□ -0.76
ZNF558-201ENST00000301475 RDH8Q9NYR8 311 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms