RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 KIAA1143Q96AT1 154 aaPredicted RBP9.62□□□□□ -0.87
GABRB3-201ENST00000299267 CD180Q99467 661 aa9.62□□□□□ -0.87
GABRB3-201ENST00000299267 MS4A8Q9BY19 250 aa9.62□□□□□ -0.87
GABRB3-201ENST00000299267 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.62□□□□□ -0.87
GABRB3-201ENST00000299267 CENPMQ9NSP4 180 aa9.62□□□□□ -0.87
GABRB3-201ENST00000299267 AASSQ9UDR5 926 aa9.62□□□□□ -0.87
GABRB3-201ENST00000299267 SMIM30A4D0T7 59 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 ITGA1P56199 1179 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 RPS15P62841 145 aaKnown RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 NPTX1Q15818 432 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 PUS10Q3MIT2 529 aaKnown RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 IQCCQ4KMZ1 466 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 SPANXN2Q5MJ10 180 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 SLC30A8Q8IWU4 369 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 NLGN4YQ8NFZ3 816 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 OR9Q2Q8NGE9 314 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 ZSCAN32Q9NX65 697 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 WSB2Q9NYS7 404 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 TMEM181Q9P2C4 612 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 TARM1B6A8C7 271 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 FESP07332 822 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 HNRNPCP07910 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 GP1BBP13224 206 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 GINS1Q14691 196 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 SMAD2Q15796 467 aaKnown RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 PERM1Q5SV97 790 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 TMEM236Q5W0B7 351 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 SYT13Q7L8C5 426 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 PPP1R3BQ86XI6 285 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 CCDC103Q8IW40 242 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 OR52R1Q8NGF1 315 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 STON2Q8WXE9 905 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 TBC1D20Q96BZ9 403 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 DUSP23Q9BVJ7 150 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 ZNF304Q9HCX3 659 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 CUTCQ9NTM9 273 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 ICKQ9UPZ9 632 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 SCN3AQ9NY46 2000 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 TRPM7Q96QT4 1865 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 INMTO95050 263 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 RPP14O95059 124 aaKnown RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 C1QAP02745 245 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 CELA2BP08218 269 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 PEPDP12955 493 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 HOXB6P17509 224 aaKnown RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 ITGA3P26006 1051 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 NUDT1P36639 197 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 RBBP4Q09028 425 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 TIMM50Q3ZCQ8 353 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 LIN52Q52LA3 116 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 OAFQ86UD1 273 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 FAM217AQ8IXS0 508 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 CHCHD4Q8N4Q1 142 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 HORMAD2Q8N7B1 307 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 C7orf57Q8NEG2 295 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 OR51Q1Q8NH59 317 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 CMKLR1Q99788 373 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 POLR2J2Q9GZM3 115 aaKnown RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 CCNB1IP1Q9NPC3 277 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 MYNNQ9NPC7 610 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 RSL24D1Q9UHA3 163 aaKnown RBP9.61□□□□□ -0.87
GABRB3-201ENST00000299267 BTNL2Q9UIR0 455 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 LIPT1Q9Y234 373 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 RNF215Q9Y6U7 377 aa9.61□□□□□ -0.87
GABRB3-201ENST00000299267 KRBA1A5PL33 1030 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 M0R129 80 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 CASKO14936 926 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 CD1EP15812 388 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 CRYZQ08257 329 aaKnown RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 TRAM2Q15035 370 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 DGUOKQ16854 277 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 TRIM46Q7Z4K8 759 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 NANOGNBQ7Z5D8 188 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 PDSS2Q86YH6 399 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ZNF547Q8IVP9 402 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ACTRT3Q9BYD9 372 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 NRSN2Q9GZP1 204 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ABCB9Q9NP78 766 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 IL1RAPQ9NPH3 570 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ZNF624Q9P2J8 865 aaPredicted RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 RTTNQ86VV8 2226 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 IGHV3-20A0A0C4DH32 117 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 EFCAB7A8K855 629 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 WWP2O00308 870 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 TNFRSF10CO14798 259 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 VILLO15195 856 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ADAM23O75077 832 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ZP2Q05996 745 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ITGADQ13349 1161 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 COLEC12Q5KU26 742 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 COX20Q5RI15 118 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 PRPF38BQ5VTL8 546 aaKnown RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ZNF57Q68EA5 555 aaPredicted RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 B3GNT6Q6ZMB0 384 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 IKBIPQ70UQ0 350 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 NAT6Q93015 286 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 PRR14Q9BWN1 585 aa9.6□□□□□ -0.87
GABRB3-201ENST00000299267 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.6□□□□□ -0.87
GABRB3-201ENST00000299267 SSR3Q9UNL2 185 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms