RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ARF5P84085 180 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 ZNF763Q0D2J5 394 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 ZNF630Q2M218 657 aaPredicted RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 ZNF791Q3KP31 576 aaPredicted RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 SPIN4Q56A73 249 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 FAM78AQ5JUQ0 283 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 GGHQ92820 318 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 SECISBP2Q96T21 854 aaKnown RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 RARRES3Q9UL19 164 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 BCORQ6W2J9 1755 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 LOC105369274A0A096LPK9 316 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 FAM227AF5H4B4 570 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 J3KTA2 159 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 ARNTLO00327 626 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 CSN2P05814 226 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 FNTBP49356 437 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 MC1RQ01726 317 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 ODF4Q2M2E3 257 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 GFOD2Q3B7J2 385 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 RPS26P11Q5JNZ5 115 aaPredicted RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 ATAD3CQ5T2N8 411 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 BCL2L15Q5TBC7 163 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 ADNP2Q6IQ32 1131 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 ZNF551Q7Z340 670 aaPredicted RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 GALNT7Q86SF2 657 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 OR4N4Q8N0Y3 316 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 PEX13Q92968 403 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 RHBDF1Q96CC6 855 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 CCDC120Q96HB5 630 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 UHRF1Q96T88 793 aaPredicted RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 DEFB126Q9BYW3 111 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 SERINC1Q9NRX5 453 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 DUXAA6NLW8 204 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 RIIAD1A6NNX1 92 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 MEN1O00255 615 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 SMAD6O43541 496 aaKnown RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 ATXN1LP0C7T5 689 aaKnown RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 HMGCLP35914 325 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 MNDAP41218 407 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 TSPAN5P62079 268 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 KCNC4Q03721 635 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 PIN1Q13526 163 aaPredicted RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 PTGES3Q15185 160 aaKnown RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 SLC36A4Q6YBV0 504 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 LYSMD2Q8IV50 215 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 MRPL38Q96DV4 380 aaKnown RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 DPH7Q9BTV6 452 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 DPAGT1Q9H3H5 408 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 ARNT2Q9HBZ2 717 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 GRIP1Q9Y3R0 1128 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 CLEC3AO75596 197 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 CRYZL1O95825 349 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 IL3P08700 152 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 EPHA2P29317 976 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 GJA4P35212 333 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 ISL1P61371 349 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 CATSPEREQ5SY80 951 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 GPR149Q86SP6 731 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 RANBP3LQ86VV4 465 aaPredicted RBP12.78□□□□□ -0.36
HPS3-201ENST00000296051 PGBD5Q8N414 524 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 GPER1Q99527 375 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 REEP4Q9H6H4 257 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 IL26Q9NPH9 171 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 PHF11Q9UIL8 331 aa12.78□□□□□ -0.36
HPS3-201ENST00000296051 LOC102723532A0A0G2JNH3 316 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 GABARAPO95166 117 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 OR12D1P0DN82 309 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 OR4C6Q8NH72 309 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 OR5M11Q96RB7 305 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 Q9N2J8 555 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 HSPE1-MOB4S4R3N1 261 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 PCDH17O14917 1159 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 NPC1O15118 1278 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 ENTPD6O75354 484 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 BPIP17213 487 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 ERP29P30040 261 aaKnown RBP12.77□□□□□ -0.36
HPS3-201ENST00000296051 OTX2P32243 289 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 ZNF311Q5JNZ3 666 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 NADSYN1Q6IA69 706 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 SLC30A6Q6NXT4 461 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 Q6ZSR6 202 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 TMEM173Q86WV6 379 aaPredicted RBP12.77□□□□□ -0.36
HPS3-201ENST00000296051 KLBQ86Z14 1044 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 HUS1BQ8NHY5 278 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 IKZF5Q9H5V7 419 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 RNF121Q9H920 327 aa12.77□□□□□ -0.36
HPS3-201ENST00000296051 SLX4Q8IY92 1834 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 COL4A1P02462 1669 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 RPP14O95059 124 aaKnown RBP12.77□□□□□ -0.37
HPS3-201ENST00000296051 S100A9P06702 114 aaKnown RBP12.77□□□□□ -0.37
HPS3-201ENST00000296051 DNASE1P24855 282 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 ITGA3P26006 1051 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 PLXDC1Q8IUK5 500 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 LAX1Q8IWV1 398 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 OR8J1Q8NGP2 316 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 COQ8AQ8NI60 647 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 PHOSPHO1Q8TCT1 267 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 ASB15Q8WXK1 588 aa12.77□□□□□ -0.37
HPS3-201ENST00000296051 OR51I1Q9H343 314 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms