RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PFN3P60673 137 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 EMX1Q04741 257 aaPredicted RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 CRYZQ08257 329 aaKnown RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 LGALS3BPQ08380 585 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 ZNF630Q2M218 657 aaPredicted RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 LCN1P1Q5VSP4 162 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 LHX8Q68G74 356 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 ASTLQ6HA08 431 aaPredicted RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 PNCKQ6P2M8 343 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 IL20RBQ6UXL0 311 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 BMP8AQ7Z5Y6 402 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 KLHL36Q8N4N3 616 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 YIPF7Q8N8F6 280 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 OR4K13Q8NH42 304 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 SAMD8Q96LT4 415 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 PTCHD1Q96NR3 888 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 ERMAPQ96PL5 475 aaPredicted RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 TRIB3Q96RU7 358 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 TRIM2Q9C040 744 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 CLEC4MQ9H2X3 399 aaPredicted RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 MARK1Q9P0L2 795 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 HEBP2Q9Y5Z4 205 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 MAGEA12P43365 314 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 CLCN2P51788 898 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 TUBA1BP68363 451 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 TUBA4AP68366 448 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 NDUFA9Q16795 377 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 TRIM71Q2Q1W2 868 aaKnown RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 ALG1LQ6GMV1 187 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 METTL2BQ6P1Q9 378 aaKnown RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 SYCE2Q6PIF2 218 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 PLEKHG7Q6ZR37 379 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 Q6ZSR6 202 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 TUBA1AQ71U36 451 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 CAMKVQ8NCB2 501 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 OR8H1Q8NGG4 311 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 S100A13Q99584 98 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 GINS4Q9BRT9 223 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 BHLHE41Q9C0J9 482 aaPredicted RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 TMEM185BQ9H7F4 350 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 SFXN1Q9H9B4 322 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 IL1RAPQ9NPH3 570 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 MBNL1Q9NR56 388 aaKnown RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 GPN3Q9UHW5 284 aaPredicted RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 SLC7A7Q9UM01 511 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 RTTNQ86VV8 2226 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 TRAV27A0A087WT01 109 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 FAM155AB1AL88 458 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 BCAS1O75363 584 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 RDH16O75452 317 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ETHE1O95571 254 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 RAB36O95755 333 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ADH1BP00325 375 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 HMGN2P05204 90 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 GIMD1P0DJR0 217 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CA5AP35218 305 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 GCGRP47871 477 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 HLCSP50747 726 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 BCAP31P51572 246 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SELENOWP63302 87 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SCN1BQ07699 218 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 GALNT1Q10472 559 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 ST3GAL3Q11203 375 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 PTGES3Q15185 160 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 ZNF829Q3KNS6 432 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 NKAIN2Q5VXU1 208 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 LRRC17Q8N6Y2 441 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 OR52N2Q8NGI0 321 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 METTL21AQ8WXB1 218 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CAMK1GQ96NX5 476 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 NTNG1Q9Y2I2 539 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 FKBP7Q9Y680 259 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 BRCA2P51587 3418 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 H0YAE9 185 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SCDO00767 359 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 HCRTR2O43614 444 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 GASTP01350 101 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CTSLP07711 333 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ITGA3P26006 1051 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 EPHA2P29317 976 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SLC15A1P46059 708 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 NR0B1P51843 470 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 SNRPD2P62316 118 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 HACD2Q6Y1H2 254 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CSNK1A1LQ8N752 337 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SMAP2Q8WU79 429 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 NIPSNAP1Q9BPW8 284 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SLC30A2Q9BRI3 323 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MMP28Q9H239 520 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 KLHL31Q9H511 634 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ZSCAN32Q9NX65 697 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ANXA2P2A6NMY6 339 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 PROM1O43490 865 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ANXA2P07355 339 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 HOXC13P31276 330 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 TAS2R38P59533 333 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ARPC4P59998 168 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SLC14A2Q15849 920 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 HNRNPA1L2Q32P51 320 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 KLHL22Q53GT1 634 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms