RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 COL4A2P08572 1712 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 IGKV1-8A0A0C4DH67 115 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 CACNB4O00305 520 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 AP3D1O14617 1153 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 PPM1DO15297 605 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 GADD45GO95257 159 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 POU2F1P14859 743 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 TEAD1P28347 426 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 CSTF2P33240 577 aaKnown RBP eCLIP17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 ENPP7Q6UWV6 458 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 NFKBIDQ8NI38 313 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 C16orf78Q8WTQ4 265 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 OR1E3Q8WZA6 343 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 SMPDL3AQ92484 453 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 TSACCQ96A04 125 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 MACROD1Q9BQ69 325 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 TMEM121BQ9BXQ6 578 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 BARHL1Q9BZE3 327 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 SLC25A19Q9HC21 320 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 EXOSC4Q9NPD3 245 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 ATP6V1HQ9UI12 483 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 MUTYHQ9UIF7 546 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 LSM2Q9Y333 95 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 TRBV23OR9-2A0A075B6M9 112 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 A0A0G2JN53 185 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 TCRBV21S2A2A0A5A6 115 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 MEIOCA2RUB1 952 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 GPR89AB7ZAQ6 455 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 LCMT2O60294 686 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 GPR89BP0CG08 455 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 TPMTP51580 245 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 C2orf80Q0P641 193 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 KRT33BQ14525 404 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 MEDAGQ5VYS4 303 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 FRMPD2BQ6IN97 320 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 KLHL17Q6TDP4 642 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 AQP11Q8NBQ7 271 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 OR52E1Q8NGJ3 308 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 RASSF5Q8WWW0 418 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 SLC35A5Q9BS91 424 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 TIMM29Q9BSF4 260 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 SRRQ9GZT4 340 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 ENPP4Q9Y6X5 453 aa17.3■□□□□ 0.36
PDLIM3-201ENST00000284767 PRSS38A1L453 326 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 J3KTA2 159 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 PLPP1O14494 284 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 IL3P08700 152 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 IL7P13232 177 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 DRD1P21728 446 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 PSMA1P25786 263 aaKnown RBP17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 CNR2P34972 360 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 PSPHP78330 225 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 RUNX1T1Q06455 604 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 ARHGAP19Q14CB8 494 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 ZNF79Q15937 498 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 ZNF630Q2M218 657 aaPredicted RBP17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 TBRG1Q3YBR2 411 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 TRIM40Q6P9F5 258 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 CHRDL2Q6WN34 429 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 Q6ZS52 159 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 KRT78Q8N1N4 520 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 HMGB4Q8WW32 186 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 ABCG4Q9H172 646 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 SLA2Q9H6Q3 261 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 NDRG2Q9UN36 371 aaKnown RBP17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 KLHL20Q9Y2M5 609 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 IQCMA0A1B0GVH7 501 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 ANKDD1BA6NHY2 528 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 ZNF670-ZNF695F2Z2N8 137 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 RHCEP18577 417 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 SNRPGP62308 76 aaKnown RBP17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 HBA1P69905 142 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 EEF1A2Q05639 463 aaKnown RBP17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 SCN1BQ07699 218 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 DOC2BQ14184 412 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 FAM181AQ8N9Y4 354 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 BMFQ96LC9 184 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 REEP4Q9H6H4 257 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 C1GALT1Q9NS00 363 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 TBC1D29Q9UFV1 150 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 ACSL6Q9UKU0 697 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 STUB1Q9UNE7 303 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 NCKAP1Q9Y2A7 1128 aa17.29■□□□□ 0.36
PDLIM3-201ENST00000284767 DSPPQ9NZW4 1301 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 PRR19A6NJB7 356 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 OR1F1O43749 312 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 CYP7B1O75881 506 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 C6orf47O95873 294 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 SERPIND1P05546 499 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 FURINP09958 794 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 CDK6Q00534 326 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 BAK1Q16611 211 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 FAM92BQ6ZTR7 304 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 SLC9B2Q86UD5 537 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 PSD4Q8NDX1 1056 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 OR2A1Q8NGT9 310 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 TMEM246Q9BRR3 403 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 C1QTNF7Q9BXJ2 289 aa17.28■□□□□ 0.36
PDLIM3-201ENST00000284767 ZNF717Q9BY31 904 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms