RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 FN3KRPQ9HA64 309 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 POLE4Q9NR33 117 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 KCNIP2Q9NS61 270 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 ARSFP54793 590 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 RNF4P78317 190 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 NOGQ13253 232 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 RAB30Q15771 203 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 MSMO1Q15800 293 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 TMEM151AQ8N4L1 468 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 DEFB126Q9BYW3 111 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 YARS2Q9Y2Z4 477 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 RAB19A4D1S5 217 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF736B4DX44 427 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 LATO43561 262 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 RFPL2O75678 378 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 UFM1P61960 85 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 RTL6Q6ICC9 239 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 TMEM173Q86WV6 379 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 OR51Q1Q8NH59 317 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ADAMTS18Q8TE60 1221 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PKP2Q99959 881 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SLC25A31Q9H0C2 315 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 DLG5Q8TDM6 1919 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF780AO75290 641 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 DGKEP52429 567 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 LILRA4P59901 499 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 CLVS2Q5SYC1 327 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ZFAND2BQ8WV99 257 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 MR1Q95460 341 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SLAMF9Q96A28 289 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ZUFSPQ96AP4 578 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PREBQ9HCU5 417 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PDE7BQ9NP56 450 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 A8MU76 341 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ARPC5O15511 151 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PRAF2O60831 178 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PABPC4LP0CB38 370 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SHMT2P34897 504 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 DUSP3P51452 185 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 RPS13P62277 151 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ANKRD54Q6NXT1 300 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SLAIN1Q8ND83 568 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF223Q9UK11 482 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 DIP2CQ9Y2E4 1556 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SLC1A7O00341 560 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 MMP20O60882 483 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ADAP00813 363 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 CLCN2P51788 898 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SNTB2Q13425 540 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 AGTRAPQ6RW13 159 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 REM2Q8IYK8 340 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 GDPD1Q8N9F7 314 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 OR4E2Q8NGC2 313 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 DEDD2Q8WXF8 326 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SGTBQ96EQ0 304 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SGCZQ96LD1 299 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ACOT13Q9NPJ3 140 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 OR7A17O14581 309 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 GLSO94925 669 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SPDEFO95238 335 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 CHRNA1P02708 482 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PRKCGP05129 697 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ERVK-25P63136 954 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ATG9BQ674R7 924 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 TPRA1Q86W33 373 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 UEVLDQ8IX04 471 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 KREMEN2Q8NCW0 462 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 DAZLQ92904 295 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 NENFQ9UMX5 172 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SCO2O43819 266 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 GRPRP30550 384 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PREPP48147 710 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ADARB1P78563 741 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 LRIT3Q3SXY7 679 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 RNF111Q6ZNA4 994 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 OR7G1Q8NGA0 311 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 OR9A1PQ8NGU1 263 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 OR8K5Q8NH50 307 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 NPLOC4Q8TAT6 608 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 MRI1Q9BV20 369 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SLC19A3Q9BZV2 496 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 REEP4Q9H6H4 257 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 FMN2Q9NZ56 1722 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 AGLP35573 1532 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 DOPEY2Q9Y3R5 2298 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 A0A0U1RQJ8 604 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 MEGF11A6BM72 1044 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 ANGPTL7O43827 346 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 EEDO75530 441 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 IL1AP01583 271 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 OR4Q2P0C623 313 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 SLC2A1P11166 492 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 RNH1P13489 461 aaKnown RBP8.35□□□□□ -1.07
NIPBL-201ENST00000282516 CHRNA6Q15825 494 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 PCGF3Q3KNV8 242 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 XKR5Q6UX68 686 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 OR10T2Q8NGX3 314 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 IL31RAQ8NI17 732 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 KIAA1191Q96A73 305 aa8.35□□□□□ -1.07
NIPBL-201ENST00000282516 CHFRQ96EP1 664 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms