RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 NAALAD2Q9Y3Q0 740 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 ZDBF2Q9HCK1 2354 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 CACNA1IQ9P0X4 2223 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 OR2W5A6NFC9 320 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 FCMRO60667 390 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 NOL3O60936 208 aaKnown RBP16.87■□□□□ 0.29
CAPN1-201ENST00000279247 DNAJB5O75953 348 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 PDE9AO76083 593 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 ALOX12P18054 663 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 ALDH4A1P30038 563 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 FAM92BQ6ZTR7 304 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 PARGQ86W56 976 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 METTL27Q8N6F8 245 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-201ENST00000279247 KLHL6Q8WZ60 621 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 POT1Q9NUX5 634 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 DNAAF2Q9NVR5 837 aaKnown RBP16.87■□□□□ 0.29
CAPN1-201ENST00000279247 SCN3BQ9NY72 215 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 IGHV1OR15-9A0A0B4J2B8 117 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 PSMB9P28065 219 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 KEAP1Q14145 624 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 KLHL17Q6TDP4 642 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 VRK2Q86Y07 508 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 CSNK1A1LQ8N752 337 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 CAMKVQ8NCB2 501 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 TMEM52Q8NDY8 209 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 OR6T1Q8NGN1 323 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 SARGQ9BW04 601 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 C3orf14Q9HBI5 128 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 IMPAD1Q9NX62 359 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 TMCC3Q9ULS5 477 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 DAPP1Q9UN19 280 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 HCN4Q9Y3Q4 1203 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 CLDN24A6NM45 220 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 H3BN98 237 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 MT-ND2P03891 347 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 WNT1P04628 370 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 RXRGP48443 463 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 KCNJ5P48544 419 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 EMX1Q04741 257 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-201ENST00000279247 TRMT12Q53H54 448 aaKnown RBP16.86■□□□□ 0.29
CAPN1-201ENST00000279247 TSPYL5Q86VY4 417 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-201ENST00000279247 OOSP2Q86WS3 158 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 ADAMTS16Q8TE57 1224 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 ZNF681Q96N22 645 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 A0A1W2PPC1 479 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 EMC8O43402 210 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 WBP4O75554 376 aaKnown RBP16.86■□□□□ 0.29
CAPN1-201ENST00000279247 ANXA8P13928 327 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 CTSKP43235 329 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 AVPR1BP47901 424 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 TNFRSF17Q02223 184 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 DEFB133Q30KQ1 61 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 COLEC12Q5KU26 742 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 MLIPQ5VWP3 458 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 LRRC25Q8N386 305 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-201ENST00000279247 OR4K14Q8NGD5 310 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 ADAMTS15Q8TE58 950 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 ZNF354BQ96LW1 612 aa16.86■□□□□ 0.29
CAPN1-201ENST00000279247 GLULP15104 373 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 TLX1P31314 330 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-201ENST00000279247 UBE2IP63279 158 aaKnown RBP16.85■□□□□ 0.29
CAPN1-201ENST00000279247 RPL6Q02878 288 aaKnown RBP16.85■□□□□ 0.29
CAPN1-201ENST00000279247 MVKQ03426 396 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 IL18R1Q13478 541 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 BHLHB9Q6PI77 547 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 CACTIN-AS1Q8N1I8 211 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 IL4I1Q96RQ9 567 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 PHOX2BQ99453 314 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 LYARQ9NX58 379 aaKnown RBP16.85■□□□□ 0.29
CAPN1-201ENST00000279247 KCMF1Q9P0J7 381 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.85■□□□□ 0.297e-22■■■■■ 89.9
CAPN1-201ENST00000279247 TPRKBQ9Y3C4 175 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 NCOR1O75376 2440 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 A0A1B0GVG6 124 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 SLC9B1P1A6NJY1 282 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 RDH16O75452 317 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 ZNF182P17025 639 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-201ENST00000279247 NT5EP21589 574 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 GSTM2P28161 218 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 C21orf33P30042 268 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-201ENST00000279247 GSTM5P46439 218 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 DCST1Q5T197 706 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 ABHD13Q7L211 337 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 CCDC103Q8IW40 242 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 SLC30A8Q8IWU4 369 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 OR13F1Q8NGS4 319 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 OR9A4Q8NGU2 314 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 PSMA8Q8TAA3 256 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 BAHD1Q8TBE0 780 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-201ENST00000279247 APH1BQ8WW43 257 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 CDS1Q92903 461 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 DUSP12Q9UNI6 340 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 POFUT2Q9Y2G5 429 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 NTNG1Q9Y2I2 539 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 PCDH15Q96QU1 1955 aa16.85■□□□□ 0.29
CAPN1-201ENST00000279247 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 A0A0J9YY10 115 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 URADA6NGE7 173 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 H1F0P07305 194 aaKnown RBP16.84■□□□□ 0.29
CAPN1-201ENST00000279247 DCNP07585 359 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms